Setaria italica (foxtail millet): 101782665
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Entry
101782665 CDS
T02818
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101782665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sita03019
]
101782665
03110 Chaperones and folding catalysts [BR:
sita03110
]
101782665
03029 Mitochondrial biogenesis [BR:
sita03029
]
101782665
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sita04147
]
101782665
Enzymes [BR:
sita01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
101782665
Messenger RNA biogenesis [BR:
sita03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
101782665
Chaperones and folding catalysts [BR:
sita03110
]
Heat shock proteins
HSP60 / Chaperonin
101782665
Mitochondrial biogenesis [BR:
sita03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
101782665
Exosome [BR:
sita04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
101782665
Exosomal proteins of other body fluids (saliva and urine)
101782665
Exosomal proteins of breast cancer cells
101782665
Exosomal proteins of colorectal cancer cells
101782665
Exosomal proteins of bladder cancer cells
101782665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
MatP_C
Motif
Other DBs
NCBI-GeneID:
101782665
NCBI-ProteinID:
XP_004962429
UniProt:
K3Z4Y0
LinkDB
All DBs
Position
III:26620061..26625050
Genome browser
AA seq
577 aa
AA seq
DB search
MASANAISTASLLRPLSQGRARRARNGRSQRFVVRADAKDIAFDQKSRAALQAGVEKLAN
AVGVTLGPRGRNVVLDEYGAPKVVNDGVTIARAIELYDPMENAGAALIREVASKTNDSAG
DGTTTASVLAREIIKLGLLSVTSGANPVSLKKGIDKTVQGLIQELENKARPVKGGGDIKA
VASISAGNDEFIGSMIAEAIDKVGPDGVLSIESSSSFETTVDVEEGMEIDRGYISPQFVT
NLEKSIVEFENAKVLITDQKITSIKEILPILEKTTQLRAPLFIIAEDITGEALATLVVNK
LRGILNVAAIKAPSFGERRKAILQDIAIVTGAEFLAKDLGLLVENATEEQLGTARKVTIH
QTTTTLIADAASKDEIQARVAQLKKELAETDSVYDTEKLAERIAKLAGGVAVIKVGAATE
TELEDRQLRIEDAKNATFAAIEEGIVPGGGTAYVHLSTIVPSIKETIEDPDERLGADIIQ
KALVAPASLIAHNAGVEGEVVVEKVKESEWEVGYNAMTDKYENLMESGVIDPAKVTRCAL
QNAASVAGMVLTTQAIVVEKPKPKPRVAEPAEGALSV
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgccaacgccatctccaccgcctccctcctccggcccctctctcagggcagg
gcgaggagggccaggaacggccggtcgcagcggttcgtggtgcgtgcggacgccaaggac
atcgcgttcgaccagaaatccagggcggcgctccaggccggcgtcgagaagctcgccaac
gccgtcggtgtcaccctcgggccccgagggaggaatgtagtgctggatgagtatggtgcg
cccaaagttgtaaatgatggagttactattgcccgggctattgagctgtatgacccaatg
gaaaatgctggcgcagcactgatccgtgaggttgctagcaagaccaatgattcggctggt
gatgggactacaactgcttctgtccttgctcgtgaaatcatcaagctaggccttctgagt
gtcacgtctggtgcaaaccctgtgtcacttaagaagggaatagacaaaactgtgcagggt
ctaattcaggagcttgagaacaaggctagaccagtcaagggtggaggtgatatcaaagct
gttgcgtctatctctgctggcaatgatgaatttatcggatccatgattgccgaagcaatt
gacaaagtgggccctgatggtgtcctttcaattgagtcttcatcatcttttgagactact
gttgatgttgaagaaggaatggagattgaccgtggatatatttctccacaatttgtgacc
aaccttgagaaatctatagtggagtttgagaatgctaaggttcttattactgatcaaaag
atcacaagcataaaggaaattcttccaattttggagaagaccacacagctgagagccccg
ctgttcattatcgctgaggacattactggtgaagctttggcaactcttgttgttaacaag
ctccgaggaatccttaacgttgcagcaattaaggccccgagctttggtgagcggcggaaa
gctatccttcaggacattgccattgttacaggtgctgagttcctagcaaaagatcttggt
ttgttggttgaaaatgctacagaggaacaacttgggacagcaaggaaagtcactatacat
cagaccacaactaccctgatagcagatgcagctagtaaagatgagatccaagcgagggtt
gcacagctaaagaaggagcttgctgaaactgattcagtttatgatactgagaaattggct
gagagaattgcgaagcttgctggtggtgttgctgttatcaaggttggagccgcaaccgag
actgaacttgaggaccgccagctacgaattgaggatgcaaagaatgccacttttgccgcc
attgaggagggcattgttcctggaggtggcacggcatatgtgcacctatccaccattgtc
ccttcaatcaaggaaacaattgaggaccctgatgagcgtcttggtgctgacattattcaa
aaggcattggtagcacctgcttcactaatcgcacacaatgctggagtggagggtgaagtg
gtcgttgagaaggtcaaggaaagtgagtgggaagtgggctacaatgcaatgacggacaag
tacgagaacctgatggagtccggtgtgatcgaccccgccaaggtgacaaggtgcgcgctc
cagaatgcggcctctgtggctggaatggttttaaccacacaggccattgttgttgagaag
ccgaagccgaagcctcgagtggctgagccggcggagggcgcccttagtgtgtaa
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