Setaria italica (foxtail millet): 101783297
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Entry
101783297 CDS
T02818
Name
(RefSeq) probable CCR4-associated factor 1 homolog 7
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101783297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sita03019
]
101783297
Messenger RNA biogenesis [BR:
sita03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101783297
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
101783297
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
101783297
NCBI-ProteinID:
XP_004956826
UniProt:
A0A368Q0W9
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Position
II:30682061..30683167
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AA seq
279 aa
AA seq
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MATPAAEKPDDVEIREVWADNLEAEFAVIRDIVDDYPYVAMDTEFPGVVCRPLGTYKSAA
EFNYATLKANVDMLKLIQLGLTFSDEHGGLPALGPGGRPCVWQFNFRGFDPRTDVAAADS
IDLLRRSGIDFARHGADGADARRFAELLMSSGVVMNSDVRWVTFHSGYDFGYLLKLLTGT
NLPDTMSGFFDLIKIYFPVIYDIKHLMRFCNSLHGGLNKLAELLDVARVGICHQAGSDSL
LTALSFKKLKEAYFNGLTEKYAGVLYGLGFEGGETTSAH
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgcccgccgcagagaagcccgacgatgtggagatccgcgaggtctgggcggac
aacctcgaggccgagttcgccgtgatccgcgacatcgtggacgactacccctacgtcgcc
atggacacggagttccccggcgtggtgtgccgcccgctcggcacctacaagtccgcggcc
gagttcaactacgccacgctcaaggccaacgtcgacatgcttaagcttatccagcttggg
ctcaccttctccgacgagcatggagggctgccggcgctcggcccaggcggccgaccctgc
gtctggcagttcaacttccgagggttcgacccgcggaccgacgtcgccgccgcggactcc
atcgatctgctccgacgcagtgggatcgacttcgcccgccacggtgcggatggggccgac
gctcgccgcttcgctgagctgctcatgtcctccggcgtcgtaatgaactccgatgtgcgt
tgggtaaccttccacagtggttacgacttcggctacttgctcaagctgcttaccggcaca
aacctgcctgacacgatgtcgggattcttcgatctcatcaagatctacttccctgttatc
tatgatatcaaacacctgatgaggttctgcaatagcctccatggtgggctgaacaagctt
gctgagctgctcgacgtagcgcgggttgggatctgccaccaggcagggtccgactcgctt
ctgaccgcgctttccttcaagaagctcaaggaggcatacttcaacgggctaaccgagaaa
tatgccggtgtgttgtatgggcttggctttgagggtggggagaccacctctgctcactga
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