Setaria italica (foxtail millet): 101783393
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Entry
101783393 CDS
T02818
Name
(RefSeq) protein SPA1-RELATED 4 isoform X1
KO
K26557
protein SPA1-related 3/4
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
101783393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sita04121
]
101783393
Ubiquitin system [BR:
sita04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
101783393
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
Beta-prop_EIPR1
EIF3I
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Pkinase
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
WD40_RFWD3
PK_Tyr_Ser-Thr
WDR54
WDR90_beta-prop_4th
Beta-prop_WDR11_2nd
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
101783393
NCBI-ProteinID:
XP_004969806
UniProt:
K3XER1
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Position
V:35655095..35662165
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AA seq
782 aa
AA seq
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MEPSRGAVGGGRRWGDAEAEVEEGRRPEEGGEVSLREWLDRPGRAVEAAECVHVFRQVAE
AVAVAHAQGVAVGSARPSCFVVSPPFARVAFIESASGSDASGSCSGSDASEDADPDASPP
RRRDGAARGEERTGKTFPLKSVLAMELSWYTSPEEAEDSGGGGSTFSSDVYRLGVLLFEL
FCTFETLEDKMRAMANLRHRVLPPQLLLRWPKEASFCQLLMHPVPETRPKMSEVLQSEFL
NQSRNSLEEREAALRLREEIEEQELLLDFLQQLQKRKQDIADNLQDTVAFLSSDINEVLH
QQSALGGQFVNFSPDLDKEVCSGTVEDQSDCGSRKRFRPELQGIDMEEQNHSVEECSRTV
PSSELIQESVLSKSSRLMKNFKKLETAYFLTRSKLVKQVGNQINSCHQVVKRATGSAVGT
EGSSIDNFPLERQYGSRQCWVNSFLEGLCKYLSFSKLKVQAELKQCDLLNSSNLVCSVGF
DRDKEFFATAGVNKKIKVFEYNMIVNEHRDIHYPVVEMSNRSKLSCICWNSYMKSHIASS
DFEGIVQVWDVTRSQVFVDMREHERRVWSVDFSIVDPTKLVSGSDDGSVKLWDMNQAGSI
GTIRTRANVCSVQFQPDTARSIAIGSADHKIYCYDLRNIRAPYCTLVGHTKTVSYVKYLD
ASTIVSASTDNSLRLWDLSMSPGRIIDSPIQTFTGHTNTKNFVGLSISDGYIATGSETNE
VFVYHKEFPMPVLAYKFSVTDPISGQEIDDPTQFISCVCWRGQSTTLLSANSSGNIKILE
MD
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggagccgtcccgtggcgccgttggcggcgggcggcggtggggggacgcggaggcggag
gtggaggaagggaggcggccggaggaggggggagaggtgagcctgcgggagtggctcgac
cgcccgggccgcgcggtggaggcggcggagtgcgtgcacgtgttcaggcaggtcgcggag
gcggtggccgtcgcgcacgcgcagggggtggccgtgggcagcgcgcgcccctcgtgcttc
gtcgtgtcgccgcccttcgcgcgcgtcgccttcatcgagtccgcctccggctccgacgcc
tcgggctcctgctcgggctccgacgcctccgaggacgccgacccggacgcctcgcctccg
cggcgacgcgacggcgccgcccgcggcgaggagcgcaccgggaagacgttcccgctcaag
agcgtgctggcgatggagctcagctggtacaccagccccgaggaggcggaagacagcggc
ggaggcggctctaccttctcctcggacgtctacagactgggcgtgctcttgttcgagctg
ttctgtacgttcgaaaccttggaggataagatgcgggcaatggctaatctgcggcatcgg
gtgttgccgccgcagcttctgctcagatggcccaaggaggcgtccttctgccagttgctc
atgcaccctgtgcctgagaccagaccgaagatgagtgaggtgctacagagtgagttcctt
aatcagtctcggaatagcctggaagagcgtgaagcagcacttaggttacgtgaagagata
gaagaacaggaattactgctggattttcttcagcagttgcagaaaagaaagcaggatata
gcagacaatttgcaggatactgttgcctttctctcttctgacatcaacgaggtcctccac
cagcaatctgcactaggggggcaatttgtgaacttctcacctgatttggataaagaggtg
tgctctggaactgttgaagatcagagtgattgtggatccaggaagcgtttcagacctgag
ctgcaaggtattgacatggaggaacagaatcatagcgtggaagaatgttccagaacagtg
ccgtcctctgagctaatccaggaaagtgttttgtccaaaagctccaggttgatgaagaac
ttcaaaaaacttgaaacagcctactttcttacaaggtccaagttggtgaagcaagttggt
aaccaaataaatagctgtcatcaagttgttaagagggctactggttcagctgttgggacc
gagggaagttcaatagataattttcctttggaaaggcaatatggcagtaggcaatgttgg
gtgaactcttttcttgagggattgtgcaagtacttgtcattcagtaagttgaaagtacag
gcagaactgaaacagtgtgatctgctgaactcatcgaacttagtatgctccgtagggttt
gaccgggataaagagttttttgcaacagctggtgtaaataagaagataaaagtgtttgag
tataatatgattgtaaatgagcatcgtgacattcactatcctgtggtagagatgtccaat
agatcaaaattaagttgtatttgctggaacagttatatgaagagccatatagcatctagt
gattttgagggtatagtgcaggtttgggatgttactaggagtcaagttttcgttgacatg
agggagcatgagaggcgagtgtggtcggtggacttctcaattgtggacccaacaaaattg
gtcagtgggagtgatgatggatctgtgaagctgtgggatatgaatcaggctgggagtatt
ggcactattagaacaagggcaaatgtgtgctctgtacaattccaacctgatactgctcgc
tccattgccattggctcagcagatcacaaaatttactgctatgatctccgtaacatacga
gctccttattgtacactggttgggcacacaaaaacagtaagctatgttaagtatctagac
gcatcaacaatagtatctgcgtctactgacaactcattgaggctctgggacttgtcgatg
agcccaggaaggataattgacagtccaatccaaacatttacagggcatacaaatacaaag
aactttgttggcctttctatatctgatggctacattgctactggctccgaaacaaatgag
gtttttgtctaccacaaagaatttcccatgccagtgttggcatataagtttagcgtgaca
gaccctatatcaggccaggagattgatgatccgacacagttcatttcatgtgtctgttgg
agagggcagtctacaactcttctttccgctaactccagcggcaacatcaagatcttagaa
atggactga
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