KEGG T02818: 101783817

Setaria italica (foxtail millet): 101783817

Entry

101783817         CDS       T02818

Name

(RefSeq) probable CCR4-associated factor 1 homolog 7

K12581

CCR4-NOT transcription complex subunit 7/8

Organism

sita Setaria italica (foxtail millet)

Pathway

sita03018

RNA degradation

Brite

KEGG Orthology (KO) [BR:sita00001]
09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    101783817
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sita03019]
    101783817
Messenger RNA biogenesis [BR:sita03019]
Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     101783817
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     101783817

SSDB

Motif

Pfam:

CAF1

Other DBs

NCBI-GeneID:

101783817

NCBI-ProteinID:

XP_004954218

UniProt:

K3Z0K3

LinkDB

Position

I:40433653..40434834

AA seq 287 aa
MEMSDPTAAVIPKPDGGDDESVEIREVWADNLEEEFALIRDVVDEFPFVAMDTEFPGIVC
RPVGAFRSPADYNYATLKANVDMLHLIQLGLTFSGPRGELPALGADRRRCVWQFNFREFD
DARDIFASDSIELLRRSGIDFRRNAERGVDARRFAELLMSSGVVLNDSVYWVTFHAGYDF
GYLLKILTCNSLPDTQAGFFKLMKIYFPTVYDIKHLMKFCNSLHGGLNKLAELLDVERVG
ESHQAGSDSLVTSCAFWKLKDSFFAGSTEKYAGVLYGLNAENGVSAH

NT seq 864 nt +upstreamnt +downstreamnt
atggaaatgtcagatcccacagccgccgtgatccccaagcccgacggcggcgacgacgag
tcggtggagatccgggaggtgtgggcggacaacctcgaggaggagttcgcgctcatccgc
gacgtcgtcgacgagttccccttcgtcgcgatggacacggagttcccgggcattgtctgc
cgccccgtcggcgccttccgctccccggcggactacaactacgccaccctcaaggccaac
gtcgacatgctccacctcatccagctcggcctcaccttctccggcccgcgtggcgagctg
ccggcactcggcgccgaccgccgccgctgcgtctggcagttcaacttccgcgagttcgac
gacgcgcgcgacatcttcgcatccgactccatcgagctgctccgtcgtagcggcatcgac
ttccgccgcaatgccgagcgcggcgtcgatgcacggcggttcgcggagctcctcatgtcc
tccggcgttgtgctcaacgattcggtatactgggttaccttccacgcgggatacgacttc
ggctatctgctgaagatcctcacctgcaacagtctaccagacacgcaagccggattcttc
aagctgatgaagatatatttcccaaccgtgtacgacatcaagcacctcatgaagttctgc
aacagcttgcacggtgggctgaataagctcgctgaactgctcgatgtggagcgtgttggg
gagtcccaccaggctgggtctgatagcctggtcacatcctgcgcgttctggaagctcaag
gattcattcttcgccggctcaacagagaaatatgcaggcgtgctgtatgggctcaatgca
gagaatggtgttagtgcacactga

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