Setaria italica (foxtail millet): 101783851
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Entry
101783851 CDS
T02818
Name
(RefSeq) SNF2 domain-containing protein CLASSY 2
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101783851
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sita03400
]
101783851
DNA repair and recombination proteins [BR:
sita03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
101783851
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SAWADEE
ResIII
Motif
Other DBs
NCBI-GeneID:
101783851
NCBI-ProteinID:
XP_004958789
UniProt:
A0A368QA04
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Position
II:49013324..49019417
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AA seq
1232 aa
AA seq
DB search
MIKGTAGHHNHPIGAVPFEAFHNGSWHGVNSIRIRNGSLFVKFVHSGSAVEHNIDGDYLR
LHSRKATCLDCSHVLRPGADVCVKQASSREETKSSVPLYRDARLIKIKKKHHTDHCLCLF
TVIFYKDQCPGSKGKVTTGTIAKVVTAGDVFILQKLHSGELQDGSVQWSSAEDCLHHNRS
KLLSARFSTEVTHLVVLSSLRGMEFNIKVVEGKIIYQIIKGDQERYSDDSMSIPPGFGKS
MDIISFKPRDEALRPRIITVQVTQVKKHNFTEDMCTTVMDELDSAQDVEVLYEHVDLRRS
KRMKTQPDRFTCYDAPNFNRTYKKKEGNASSTKNENSQSDSSWDSPVQGESSDEEVLGNP
WVKQTVFGPFMVKEDPSSMEVQRKNPMKRTKCSFPVKEKPTCVEIEKNAAEQRSPDSHIP
HTPAKNKEKNSRPPLSFRLKPFTSSHSQGGNSEPAFCQKRGRKRKKHMREREYKEMIDQC
IGNIQYEMERDSDFKLDVQIMNCNGHAYQEGDFTWPPSTDSQEEKDEFEELWKEMDYALA
SIALLEQKQMQDSEATRESNTDLGKGEHCHHDCILDEQLGLTCRLCNVVCTEAKDIFPPM
FAGKDYERSGRSGFCQDDHVLDSSFLEICAPEFSKFKGSGNVWASITDLEPKLHAHQRKA
FEFIWKNLAGSLQLEEMDDSTASRGGCVVAHTPGAGKTLLLISFLVSYLKVHPRSRPLVL
TPKAAIHTWRREFETWGISLPLHVLHYSNGRGKAMGTLSSKTQAILKNFHQPSLKMMRMM
DSLDKLCKWHESPSILLMTYPSFLALTKEDTKLQHRAFMAKVLMNNPGLLILDEGHNPRS
NKSKLRKLLMKVKTEFRILLSGTVFQNNFEEYFNTLSLARPRFVSDVMTALVPEAERETR
NRTGKHQEAVARRIFVEKVGQKIESSSMHDRVDGISLLNKLTCGFIDIFEGTKENNLPGI
RVYTLFMKPTDIQEEVLAKVTMPVPGIARYPLEVELLITIASIHPWLIKTTKCASTYFTP
KEVARVEKYKQKYTVGCKTKFVIDLLHKSSFRGERVLIFCHNVSPINFLVKLIEIVFGWR
LGEEVLVLQGDQELPVRSDVMDKFNGDRKGKRKVLIASTTACAEGISLTGASRLVMLDSE
WNHSKTMQAIARAFRPGQERMVYVYLLVASGTWEEDKYNSNRRKARIAKMVFLGRYVDEP
LQNNVTEIDDEVLKELADEDQTKAFHKVVKQD
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagggaaccgcaggccaccataaccaccccatcggtgcagttccattcgaggca
tttcataacggatcatggcatggagttaattctataaggatacggaatggcagcctcttt
gtgaaatttgtccactctggatctgctgtcgagcataacattgatggggactatctgcgc
ttacattccagaaaagcaacttgcttagattgctcacatgttctcaggccaggtgcagat
gtctgtgtaaagcaagcaagttccagagaagaaacaaaatcttctgtaccattgtatcgt
gatgcaaggctcatcaaaatcaagaaaaaacatcacacagaccactgcctctgcttattt
actgttattttctacaaagaccagtgccctggcagtaaaggaaaagtgacaactggtaca
atagccaaggtagtgacagcgggtgatgttttcatcttgcaaaagctccattctggggag
ctgcaggatggcagcgtgcaatggagttcggcagaggattgcctccatcataatagaagc
aagctgttaagtgcaagattctccacagaagttacacacctggtagttttgtctagcctg
aggggaatggaattcaacatcaaggtggtagaaggtaagatcatttatcaaatcatcaaa
ggagatcaagagcggtatagtgatgattccatgagcatacctccaggttttggcaagagc
atggacataatatcattcaaaccacgtgatgaggctttacgtccaaggatcataacagtt
caagtcactcaggttaagaagcacaatttcacagaagacatgtgtaccactgtgatggat
gaattggatagtgcacaagatgttgaagtcttgtacgagcatgtggacttgagacgttca
aagcgtatgaaaactcagccagaccgctttacttgttacgatgcacctaatttcaatcga
acctacaagaagaaagagggaaacgcatcatcaaccaagaatgagaattcacagagtgat
tcgagttgggattcaccagttcagggagaatcaagtgatgaagaggtgctaggaaatcct
tgggtgaagcaaacagttttcgggcctttcatggtcaaggaagacccaagttccatggaa
gtccagcgcaagaacccaatgaaaagaactaaatgctcttttcctgtaaaggaaaaacca
acctgcgtggaaatagagaagaatgcagctgagcaaaggagcccggattcccacattcca
catacacctgcgaagaacaaggagaagaacagtcgtccacctttatcatttcgattgaag
ccatttacttcatctcacagccaaggtggcaatagtgaaccagcattctgccaaaagagg
ggtaggaaaagaaagaaacacatgcgtgaaagagaatacaaggaaatgatagaccaatgc
attggaaatatccagtatgaaatggagagagattctgactttaagctagatgtacagata
atgaactgtaacggacatgcttaccaagaaggggattttacatggccgccttccactgat
agtcaagaggagaaggatgagtttgaagaactgtggaaagaaatggactatgcattggcc
tcaatagcacttcttgagcaaaagcagatgcaagattcagaagccactcgtgagagcaat
actgatctaggaaaaggagaacactgtcatcatgactgcatactggatgaacagcttggt
ctaacctgcaggttgtgcaacgtcgtgtgcactgaggcaaaggatatctttccaccaatg
ttcgctggtaaggactatgagaggtctggacggagcggattttgtcaagatgatcatgtg
cttgactcttcttttcttgagatctgcgcaccagaattctccaaatttaagggatctggg
aatgtgtgggcttcaatcactgatcttgaaccaaagttacatgctcatcaaagaaaagca
tttgaatttatatggaaaaacttggcaggctcattacagcttgaagaaatggatgattca
acagcgagtagaggtggctgtgtggttgcacatactcccggagcgggtaaaacactgttg
ctgatctcatttcttgtcagttacttgaaagttcacccaagaagccgaccattggtgctt
actccaaaagctgcaatccatacatggaggagagagtttgagacatggggcatttcgctt
cctttacatgtgctccactactctaacggaaggggaaaagcaatggggactcttagttca
aaaacacaggcgattttgaagaatttccaccaaccatccttgaaaatgatgcggatgatg
gatagtctggacaaattgtgcaagtggcatgagagtccaagcattcttctcatgacatat
ccatctttcttagcacttacaaaagaagacacaaaactgcagcatcgggcgttcatggcg
aaagttctgatgaacaaccctgggctattgatcctcgatgaagggcacaacccaagaagc
aacaaatcaaagttgagaaagctactgatgaaggtgaagactgaatttagaattctcttg
tctggtacagtcttccagaacaacttcgaagagtatttcaacaccttatctttggccaga
cctcgttttgtcagtgatgttatgacggcgctagttccagaagcggaaagggaaacacgg
aacaggactggtaaacatcaagaagcagtggcaaggcgcatttttgtggaaaaagtgggg
caaaagattgagtctagtagcatgcatgacagagtggatggcatctcattgttaaacaag
cttacttgtgggttcatcgatatatttgaagggacaaaagaaaacaatcttccagggata
cgtgtgtatacccttttcatgaaacccactgacatccaggaagaggtgctagcaaaagta
acaatgcccgtaccgggcattgcccgttatcctctggaggttgagctgctcatcacaatt
gcttctatccatccttggcttataaaaacaaccaagtgtgctagcacttactttacccca
aaagaagtagctagagttgagaagtacaagcagaagtacactgttggttgcaagacaaaa
tttgtgattgatcttctgcacaagtcctcattcagaggggagagggtgctgatattttgt
cacaatgtatccccgataaactttcttgtcaagctgatagagattgtgtttggatggcgt
cttggggaggaagtcctggtgttgcaaggtgatcaagagctccctgtgcgctcggatgtc
atggataaattcaatggtgatagaaaggggaagaggaaggtgctgattgcttcaacaaca
gcctgtgccgagggtatcagtctgaccggtgcatcaagactagtgatgctggattcagag
tggaaccattcaaagacaatgcaagctatagcaagggcattccggcctgggcaggagaga
atggtatatgtctaccttcttgtggcatctgggacatgggaggaagataaatacaacagc
aacaggaggaaagctcggattgcaaaaatggtcttccttggacgttatgttgacgaacca
ttgcaaaacaatgtgactgaaatcgatgatgaagttctgaaggagcttgctgatgaagat
cagaccaaagctttccataaagtagtgaagcaggactga
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integrated database retrieval system
