Setaria italica (foxtail millet): 101784009
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Entry
101784009 CDS
T02818
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sita03036
]
101784009
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sita00535
]
101784009
Chromosome and associated proteins [BR:
sita03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
101784009
Meiosis-specific proteins
Cohesin complex and associated proteins
101784009
Proteoglycans [BR:
sita00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
101784009
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
APG6_N
DUF7504
AAA_29
Motif
Other DBs
NCBI-GeneID:
101784009
NCBI-ProteinID:
XP_004962800
UniProt:
A0A368QM84
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Position
III:44011029..44022762
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AA seq
1204 aa
AA seq
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MYIKKVIIEGFKSYREEISTEPFSPKVNVVVGANGSGKSNFFHAIRFVLSDMFQNLRSED
RGALLHEGAGHSVVSAFVEIVFDNTDNRIPVDKEEVRLRRTVASKKDEYYLDGKHVSKTE
VMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEDRRRESLKIMQ
DTANKRKQIDQVVRYLEERLRELDEEKEELKKYQQLDKQRRSLEYTILDHELNDARNELA
SMDDNRRKISESMSHADNEVVDVREMIKSFDKEIKVSTKGINDTKAQKEGVEKRRTEALK
VVAQIELDLRDIKDRIVNEKRAKDEAARDLHSVRRESEKSKSELAEISKVHQAKLKEEEE
ISKSIMDREKRLSILYQKQGRATQFANKAARDNWLQKEIEDLEPVLLSNRKQEGLLQEEI
QKLKDEISNLTNYIESRKSESSKLEATLAKRHNDYNDLRKQRDVLQEERKSFWTEETDVG
AEIQRLRDELTKAQKSLDHATPGDIRRGLNSVSRIIRDHGISGVFGPVLELVDCEEKFFT
AVEVTAANSLFHVVVENDDISTRIIQILTREKGGRVTFIPLNRVKVPDLNCPQSPDFVPL
LKKLKYRADHRRAFEQVFGRTVICRDLETATKVARGNSLDCITLDGDQVSKKGGMTGGFY
DSRRSKLKFVKIIRDSKIAIEKKTAHLENVGNKLKDIDKKITDLVTRQQQMDAERDHAKS
ELEQIKVDITSAMKQKGSLEKALGKKEKSLENIRNQIEQIQSSIAMKNDEMGTELIDQLT
SEERDLLSRLNPEITELKEKFLLCKNSRIEIETRKEELETNLSTNLIRRQKELEAIISSA
DSRTLPLEAESKEQELKSSKRNLDELTSLLKANVDAINNFTRKMDDLKRKRDDLKTREAI
LEQTVQDGAKDLEQLMNSRSTHLAKQEECMKKIRDLGSLPADAFEAYKRKNKKQLQKMLY
ECNEQLKQFSHVNQKALDQYVNFTEQREQLQRRRAELDAGDQKIMELISVLDQRKDESIE
RTFKGVARHFREVFSELVQGGHGYLVMMKKKDGDAGDDDNDEDGPRDPDPEGRIEKYIGV
KVKVSFTGKGETQSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAALDPQYRTAV
GNMIRRLADVADTQFIATTFRPEIAKVADKIYGVTHKNRVSYINVVSKEQALDFIEHDQT
HNAS
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgtatataaagaaggttataattgaagggtttaagagctacagggaggagatctcaaca
gaacccttcagccccaaagttaacgtagtcgttggtgcaaatggatccggcaaatcaaat
ttctttcatgctatacgatttgtcctgagtgacatgtttcagaatcttcggagtgaagat
aggggtgcccttctccatgaaggtgctggacactcggttgtatctgcttttgttgagata
gtgtttgataatacagacaaccgtattccagttgataaagaagaggtacgcttgcgcagg
actgttgcttcaaagaaggatgaatactacttggatgggaagcatgtcagtaaaactgaa
gtcatgaatcttctagagagtgctggtttctctcgttctaatccatactatgttgtccag
caaggaaagattgcatcccttaccctgatgaaagattctgaacgactggatcttctcaaa
gagatcggtggtacacgcgtttacgaggatagacggcgtgagagcttgaaaataatgcaa
gatacagctaacaaaaggaagcagattgatcaagttgtccgctacttggaagaaagacta
agagaacttgatgaagagaaagaagaactgaagaagtaccagcagctggacaaacagaga
agatcactcgagtatactatattggaccatgaactaaatgatgcaaggaatgaattagct
tcaatggatgataaccgaagaaaaatttccgaaagtatgtcccatgcggataatgaagtg
gtggatgtacgtgagatgatcaagagttttgataaagaaataaaagtctcaactaaaggg
ataaatgataccaaggcgcaaaaggaaggtgttgagaagaggcgtactgaagcactgaag
gtagttgctcagattgaacttgatttgagagatataaaagacaggattgtgaatgagaag
agagcaaaggatgaagcagcgagggatttgcatagtgtgaggagggagagtgaaaagtca
aagtctgaattggctgaaattagtaaggtgcatcaggccaaattaaaggaagaggaggag
atatcaaagagcattatggatcgtgagaagcggctaagcatattgtaccaaaagcagggg
agggcaacccaattcgcaaacaaagctgccagggataattggcttcaaaaggaaattgaa
gatcttgagcctgtacttttgtcaaatagaaagcaggaaggtttacttcaagaagaaatt
cagaagcttaaagatgaaattagtaatttgactaactacattgagtctcggaaaagcgaa
tcaagcaagttagaggccacacttgcaaaaagacataatgattacaatgatttgaggaag
cagagagatgtgcttcaggaagaaaggaagtcattttggacggaggaaactgatgtggga
gctgaaattcaaaggctaagagacgaacttacaaaggcacagaagagcttggaccatgca
acgcccggggatatcaggagaggcctgaattctgttagcagaatcattagggaccatggt
atttctggagtttttggtcctgtattagaactggttgattgtgaagagaagttctttaca
gctgttgaggtcactgctgcaaatagcttgttccatgtggttgttgagaatgatgacata
tcaacaaggatcattcaaatattgactcgagaaaaaggtggaagggtgacatttatacca
ttaaacagagtgaaagttccagacctaaattgtccacaaagtcctgattttgttccgttg
ttaaaaaaattgaaatatcgtgccgatcatcgtcgtgctttcgaacaggtttttggcaga
acagtaatatgtcgagacctggaaactgcgactaaagttgcacgtggcaatagtctagat
tgcattacactcgatggtgatcaagtgtcaaaaaaaggtggtatgacaggaggtttctat
gactctagacggtcaaagctgaagttcgtgaaaataataagggatagtaagatcgcaatc
gagaaaaagacggcgcatctagagaatgtcggaaacaagctaaaagatatagataagaaa
attacagatttagttaccagacagcaacaaatggatgctgaacgtgatcatgccaagtcg
gagttggagcaaattaaggttgacatcaccagtgcaatgaagcaaaaggggtcacttgag
aaagcccttggcaagaaggaaaaatcacttgaaaacatccgcaaccaaattgagcaaatc
caatctagcattgcaatgaagaatgacgaaatgggcacagaacttattgatcagctaaca
tcagaggaaagagatctcctttcacgattgaatcccgaaattactgaattaaaggagaag
tttctattgtgtaaaaacagtcggattgagattgaaacaagaaaggaagaattggagacc
aatttatcaacaaatctgatcaggcgtcagaaagagctagaagcaataatttcatctgcc
gattctagaaccttgcctctggaagctgagtcgaaagagcaagaattgaaaagttctaag
agaaatcttgatgagttaacttcgttattgaaggctaatgttgatgccataaataacttc
accagaaagatggatgatctgaaaagaaaaagggatgatctgaagactcgtgaagctatt
ctggagcagactgtacaagatggtgccaaagacttggaacagttaatgaacagcaggagc
actcatctagccaagcaagaagagtgcatgaagaagatccgagacttgggctcattgcct
gctgatgcttttgaagcgtacaaaaggaaaaacaagaaacagctgcagaagatgctttat
gagtgcaacgagcagttgaagcagtttagtcacgtcaaccaaaaggctcttgaccagtat
gtcaacttcacagaacaacgggaacaactgcagagaaggcgagctgagctggatgctggt
gatcagaaaattatggaactaatatcagttttagaccaaaggaaggatgaatcgattgag
cgcacatttaaaggggttgcaaggcacttccgtgaagtgttctctgagttagtgcaaggt
ggtcatggatatttggttatgatgaagaaaaaggatggggatgcaggtgatgatgataat
gatgaggatggacctcgtgacccagatcctgaagggagaatagagaagtatatcggtgtg
aaagtcaaggtttccttcactggcaagggagaaactcagtctatgaaacaattgtcaggg
ggacagaagacagtggtggcgttgacactgatttttgctatacaacgatgtgatccagca
ccattttatctgttcgatgagattgatgctgctctggatccacagtaccgaacagccgtc
gggaatatgatccgccgtctagctgacgtggctgacacccagttcattgcaaccacattc
cgaccagagattgccaaagttgctgataagatatatggtgtgacacacaagaacagggtg
agctacattaatgtggtgtcgaaggagcaggcgctggacttcattgagcatgatcagact
cacaatgccagctga
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