Setaria italica (foxtail millet): 101784080
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Entry
101784080 CDS
T02818
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 2 isoform X1
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sita04121
]
101784080
Enzymes [BR:
sita01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101784080
Ubiquitin system [BR:
sita04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101784080
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-ANAPC11
AF_0924
Prok-RING_4
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
101784080
NCBI-ProteinID:
XP_004972418
UniProt:
K3YKW7
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All DBs
Position
VI:370707..375605
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AA seq
507 aa
AA seq
DB search
MTCPRGWRSFPLCFFLVICLMVQLGACNVVLMANNTTLSFDDVEATFTPAVKNSGANGVL
YAAEPLDACSPLTTKAVKGSASPFALVIRGGCQFDDKVRNAQNAGFKAAIVYDNEDNGVL
VSMAGSSSGVHIYAVFISKASGEVLKKYSGQTEAELWIIPTYENSAWSIMAISFISLLAM
SAVLATCFFVRRHQIRRDRARIPQAREFHGMSSQLVKAMPSLIFTKVQEDNCTSSTCAIC
LEDYTVGEKLRVLPCRHKFHAACVDLWLTSWRTFCPVCKRDANAGTSNPPVSESTPLLSS
AIRLPAESTALASFRSTVAASPPRPISRHPSSQSISRNYSISSSGIPRTPNPHRSCANSP
PIYRSGSNVDLANMSSPWSRTSHLASAHSLYGGHLSPPINIRYTSPHVSCSGYGSPSRYI
GSSHFSHGSPRYYPGSSGQQHPYLRHCTLSGPSLFTMVPPSPQQTQLQHGGDSETSLSAA
ASTQSFCQLYLQHCPDSDTSSQSLPGC
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgacatgtccaagaggatggagatcattccccctttgtttctttctggtgatttgcctc
atggttcagctgggagcttgcaatgttgtactcatggcgaacaacacaaccctgtcattc
gatgatgtcgaggcaacctttactccagcggtgaaaaattcaggtgcaaatggtgtgctt
tatgctgctgaacctctggatgcatgcagtccgttgacaacaaaagcagttaaaggatct
gcctcaccatttgctttggttataagaggcggttgccaatttgacgacaaagttagaaat
gcacagaatgctggattcaaggctgctatagtatatgataatgaagacaacggcgttctt
gtttcaatggctggaagctcatccggagtccacatatatgcggtattcatctctaaggcc
tcaggagaggtgttgaagaaatactcaggtcaaactgaagcagagttgtggataatacca
acatacgagaactcagcttggtcaatcatggcaatttcattcatatcactgcttgctatg
tctgctgtcctagctacttgtttctttgtgaggagacaccagataagacgagacagggct
cgaatcccccaagctcgagagttccatggaatgagcagtcaattagttaaagcaatgcca
agtctcatcttcacaaaagttcaagaagacaattgtacatcatcaacatgtgccatttgc
ttggaggactacactgtgggagaaaaactaagagtgctaccttgtcgacacaagttccat
gcagcttgtgtggacctgtggcttacctcgtggcgaacattctgccctgtatgcaagcgg
gacgcaaatgctggaacatcaaacccacctgtatcagagtctacccccttgctttcttcc
gctattcgcttacctgctgaatcaaccgctttagcttcattccggtcaacagtggcagcc
tctcccccaaggccaatcagccggcatccttcatcacaatccatatcccgtaattactcc
atttcaagttctggtatccctcgcacccctaacccccataggtcttgtgcaaactcacct
cccatctacagaagcggaagcaatgtagaccttgcaaatatgtcatccccatggtctcgc
acatcacaccttgcatccgcgcactcattgtatgggggccatttgtctccaccaatcaac
atcaggtatacttcaccacacgtctcctgttctggctacggatctcccagtcggtatata
ggttcatcacacttttcccatggatctccgaggtattaccctggatcttcagggcagcag
cacccttacctgcggcactgcacactgtcaggcccgagcctgttcaccatggtgccgcca
tcaccacaacagacccagcttcagcatggtggcgactcggagacaagtttatcagctgcg
gcatcaactcagtcattctgtcagctctacctacagcattgtcctgactctgacacgtca
tctcagtcgctaccagggtgctga
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