Setaria italica (foxtail millet): 101784568 Help Entry 101784568         CDS       T02818                                  Name (RefSeq) pre-mRNA-processing factor 19   KO K10599   pre-mRNA-processing factor 19 [EC:2.3.2.27] Organism sita  Setaria italica (foxtail millet) Pathway sita03040   Spliceosome sita04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:sita00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     101784568   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     101784568  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:sita03041]     101784568    04121 Ubiquitin system [BR:sita04121]     101784568    03400 DNA repair and recombination proteins [BR:sita03400]     101784568 Enzymes [BR:sita01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      101784568 Spliceosome [BR:sita03041]  Complex B   Other components    Prp19 complex     101784568  Complex C    Prp19-CDC5 complex     101784568 Ubiquitin system [BR:sita04121]  Ubiquitin ligases (E3)   U-box type E3    101784568 DNA repair and recombination proteins [BR:sita03400]  Eukaryotic type   Other factors with a suspected DNA repair function    PSO4 complex     101784568 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40_Prp19 WD40 Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WD40_MABP1-WDR62_2nd WDR55 EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_SCAP Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_DCAF12 Beta-prop_EIPR1 Beta-prop_IFT122_1st Beta-prop_SPT8 WDR90_beta-prop_4th NBCH_WD40 U-box Beta-prop_DCAF4 PEP5_VPS11_N PAN2_N zf-Nse RMC1_N WDR54 Beta-prop_NWD2_C PUMA_CC V_ATPase_I_N Motif Other DBs NCBI-GeneID:  101784568 NCBI-ProteinID:  XP_004982929 UniProt:  A0A368SJN9 LinkDB All DBs Position IX:17257009..17264980 Genome browser AA seq 526 aa AA seqDB search MICAISGEVPDEPVVSKKSGLLFERRLIERYVEDHGKCPVTKEELTMDDIVPVKTNKVVK PRPLQAASIPGLLGIFQNEWDALMLSNYSLEQQLHTARQELSHALYQHDAACRVIARLKK ERDEARTLLAQAERQIPASVAAAAPAAVVSNGKRATEDEIGPDGKKIRPGINPVMIDELT ECNTMLSAQRKKRQVPPTLAPIDALERYTQISSHPLHKTNKPGILSMDIHPSKDIVATGG IDTNAVLFDRPSGQILCTLTGHSKKITTLKFVPRDGLFVTGSADKTVRIWQESENGNYNC IHTLKDHTAEVEAVTVHATQKYFVTASKDNSWCFYDISTGSCLTQVGEASGQEGYTSASF HPDGLILGTGTTDAVVKIWDVKTQSNVAKFEGHVGPVTAMSFSENGYFLATAAHDGVKLW DLRKLRNFRTFSPYDSDTPTNAVEFDFSGNYLAIGGSDIRVHQVANVKVEWNLIKTLPDL SGTGKVTSVKFGADAKYIAVGSMDRNLRIFGLPGDDQMEESNTAAE NT seq 1581 nt NT seq  +upstreamnt  +downstreamnt atgatctgcgcgatctccggcgaggtgccggacgagccggtggtgtccaagaagtcgggg ctcctcttcgagcggcggctcatcgagcgctacgttgaggaccatggcaagtgtccggtc accaaggaggagctcaccatggacgatattgtgccggtcaagaccaacaaggttgtgaag cctaggcctttgcaggctgcaagcattccaggactccttgggatttttcaaaatgagtgg gatgctctcatgctttctaattattctttggagcagcagcttcacacagcaagacaagaa cttagtcatgcgctctaccagcatgatgccgcctgccgtgttatagccagattaaagaag gaaagagatgaggctagaacacttttggctcaagctgagagacagattcctgcatcagtt gcagcagctgctcctgcagctgttgtttccaacggaaaaagagcaacggaagatgaaatt ggccctgacgggaagaagattcgtcctggtatcaaccctgtcatgattgatgaacttaca gagtgtaataccatgctttcagcacagcgtaagaaaagacaggttccgccaactctggcg ccgattgatgcacttgagagatatactcaaatcagtagtcatccccttcataagacaaac aaaccaggcattttgtccatggacattcatccttcaaaggacattgttgcaactgggggt atcgacacaaatgcagtgctgtttgatcggccatctggtcaaatcttgtgcacgcttact ggtcactcaaagaagataaccactttgaagtttgttccacgggatggactctttgtaact ggatctgcagataagactgttcgcatttggcaagagagcgagaatggaaactataactgc atccatacattgaaagatcatactgctgaggttgaagctgttacagtccatgcaactcaa aagtatttcgtgactgcttccaaggataactcctggtgcttctatgatatatcaacagga tcttgcctcacacaggttggcgaggcttcaggacaagagggatatacatctgcatctttc catccagatggtcttatccttggaacaggaactactgatgctgttgttaaaatttgggac gtgaagactcagtcaaatgttgcaaagtttgaggggcatgttggaccagtcactgctatg tccttctctgaaaatggttacttccttgctactgctgctcatgatggtgtcaagctttgg gatcttcggaaattgaggaattttaggaccttctctccctatgattcagacacgccgacg aatgctgtggaatttgattttagcggaaactatcttgccattggtggttcagacataagg gttcaccaagtagctaatgttaaggttgagtggaatcttatcaagacgttaccggattta tcaggaactggtaaagtaacttctgtgaagtttggagccgatgctaagtacattgccgta ggttctatggaccgcaacctacggatatttggactccctggagatgaccaaatggaggaa tcaaacacagcagctgagtga

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