Setaria italica (foxtail millet): 101784985
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Entry
101784985 CDS
T02818
Name
(RefSeq) LOW QUALITY PROTEIN: structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sita03400
]
101784985
DNA repair and recombination proteins [BR:
sita03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
101784985
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_15
AAA_29
AAA_21
NACHT
AAA_16
AAA_25
AAA_27
ABC_tran
Motif
Other DBs
NCBI-GeneID:
101784985
NCBI-ProteinID:
XP_004966257
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All DBs
Position
IV:complement(37671286..37683488)
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AA seq
1056 aa
AA seq
DB search
MAAPRAAKRAKLGPGAAPAPERGDDDYVPGNIVEIELCNFMTYDRIVCRPGPRLNLVVGP
NGSGKSSLVCAIALGLAGDPNILGRASSVGAFVKRGEVAGHVKISLRGDTPNDKICITRK
IDTKNKSEWLLNGATVPKKEIIDVIKRFNIQVNNLTQFLPQDRVSEFAKLSPIQLLEETE
KAVGDPDLPVQHRQLVERSKELKALEVALKQKEQTLNNLKALNAEQEKDVERVRLRDNLL
RKAELMRKKLPWLKYDMMKKEFITVIQEQEKISKKKMEEAARIWDDAKGPIEELKKHKAT
HTSNIKKISNQVNENMTKRQKVIDKELQLNTELKATFDDIDDLKKQEKSRQQRILKAKED
LAAAEKELEGLQPYEQPKAEMAQLRDQIAQVNVEIKNLKAERNTVESQLAREDESMRKCS
YRLKEMESKNHKLLQALQINGADNISEAYHWVQDNKKNFRREVYGPVLLEVNVQDKLHAT
YLESHVPNYIWKSFITQDASDRDYMAREMKKYGIPVLNYIVDEGIRRRPLNITPEMEQLG
IYSRLDQVFQAPDAVKDVLISQAILDDSYIGTDETHCRADQVSKLGISDFWTPNNHYRWS
KSRYGGYMSASVDAVNPSRLFKSNLDVSDIENLRLQKEKHEKDIEGMHEAXKQLRETEQL
EDEEANIHRQKEEIINMMKSQKKKREEIQRRVDMRRRKLEDLCKEEDVESSTRKLVDQVA
KLNDRRFQAMKELKDLLTEAVALKWSHTEKHMASIELDAKIWEMEKGVKKLEKDANLAAR
EYEDCKRITAEHKRKLAMAKQHAESIAKISDLEKEFRAMPPTIEELEAAIQDTELEANSM
LFLNQNVLQEYQNRQREIESISNKLKGDKDEYEICCSEIETVKGKWLPTLRTLVSKINDT
FSHNFQEMAVAGEVSLDEHGLDFDHYGILIKVKFRQTSQLQVLSAHHQSGGERSVSTILY
LVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQINTPQCFLLTPKLLPDLEYS
DACSILNIMNGPWIEKPAEVWSAGDCWRDVMRSAVH
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atggcggccccgcgcgccgccaagcgcgccaagctcggccccggcgccgcgccggccccc
gagcgcggggacgacgactacgtgccggggaacatcgtggagatcgagctctgcaacttc
atgacctacgaccgcatcgtctgccgccccggcccgcgtctcaacctcgtcgtcggcccc
aacggctccggcaagagctccctcgtctgcgccatcgcgctcggcctcgccggggacccc
aacattcttgggagggcgtccagcgtcggcgcattcgtcaagagaggggaggttgccggg
cacgtcaagatatccctccgcggggatacgcctaatgacaagatctgcattactaggaag
attgatacgaagaacaagtccgagtggctcctcaatggtgcaactgtccccaaaaaggag
atcattgatgtaattaagagattcaatattcaagttaacaacttaactcagttcttgcca
caagatcgggtgtctgaatttgcaaagctaagtcccattcaacttctagaagagactgaa
aaggctgttggcgatcctgatttacctgttcagcatcgtcaacttgtagagagaagtaag
gaactgaaagcacttgaagtggctctaaagcaaaaggaacagactttgaataatctgaaa
gcccttaatgctgaacaagaaaaagatgttgaacgtgttcgattacgagataatctcctg
agaaaggctgagttaatgaggaagaagctgccatggctgaagtatgacatgatgaagaaa
gaattcataacagtaatacaggagcaggagaaaatttcaaagaagaaaatggaagaagca
gccagaatctgggatgatgcaaaaggtcctattgaagaactcaagaaacacaaggcaact
catacttcaaacataaagaagataagtaaccaagtaaatgaaaacatgaccaagcgccag
aaggttattgacaaggaactgcagctgaatacagaattgaaagccacatttgacgacatt
gatgatttgaaaaagcaagaaaaatctcgccagcaaaggattcttaaagctaaggaagat
cttgctgctgctgaaaaggaacttgaaggcctacagccgtatgaacagcctaaagctgaa
atggcacaactccgagaccaaattgcacaagtaaatgtggagataaaaaatctaaaagca
gaaaggaatactgtggagtctcagttagctcgagaggatgaaagcatgaggaaatgttct
tatagactgaaggaaatggaaagcaagaatcataagctacttcaagcattgcaaattaat
ggtgctgataacatcagtgaagcataccactgggtgcaagataacaaaaagaatttcagg
cgagaagtttacgggcctgttcttcttgaggtaaatgttcaggataagctccatgcgact
tatttggaaagccatgttccaaactatatatggaagtcattcatcactcaggatgcttct
gaccgtgactacatggctagagaaatgaagaagtatggcatccctgttctgaactacata
gtggatgaaggcatcaggagacgaccattaaacattactccagagatggaacaacttggg
atctactcccgacttgatcaagtatttcaagcccctgatgctgtaaaagatgttctgatt
agtcaggcgattttggatgattcgtacataggtacggatgaaactcattgcagagcagat
caggtatcaaagttaggtatttctgacttttggactccgaataaccattatcgatggtcc
aaatccagatatggcggttatatgtcagcatctgtagatgcagtcaatccttctcgtctt
ttcaagtccaatcttgacgtaagtgacattgaaaatcttcgacttcagaaagaaaaacat
gaaaaggacattgaaggaatgcatgaagctntaaaacagctcagagaaacagagcaattg
gaagatgaagaggcaaatatacacaggcaaaaggaagaaattattaacatgatgaaatcc
caaaagaagaaacgagaagaaatacaaaggcgtgttgatatgagaaggagaaagctggag
gacttatgcaaagaggaagatgtagaatctagcacaagaaagctggttgatcaggtggct
aagttaaatgacaggcggtttcaagcaatgaaggaacttaaggatttgcttactgaagca
gttgctctcaagtggagtcacacagaaaagcacatggcttccattgagcttgatgctaag
atatgggagatggaaaagggtgtgaaaaaacttgaaaaggatgctaatctggctgccaga
gaatacgaagattgtaagagaataactgcagagcataagcggaagctggctatggcgaaa
cagcatgcagagtctattgccaagatcagtgacctggaaaaagagtttcgtgcgatgcct
cctaccatagaagaactggaagctgcaatacaagatactgaattggaggcaaattctatg
ctatttctaaaccaaaatgttttgcaggagtatcaaaacaggcaacgcgagatagagtca
atctcaaataaacttaagggtgataaagatgaatatgaaatatgctgctccgaaattgaa
actgtaaagggtaaatggcttccaactctgcggactcttgtttcaaaaataaacgacaca
ttcagtcataactttcaagaaatggcagttgctggagaagtttcactggatgagcatggt
cttgattttgatcactacggcattcttataaaggtgaagtttaggcaaactagtcagctg
caggtgctaagtgctcatcaccaatctggaggggagcgatcagtatcgaccatcttgtat
cttgtgtcacttcaagatcttaccaactgcccctttcgggtggttgatgagataaatcaa
ggaatggaccccataaatgagaggaagatgttccagcagcttgttagagctgccagccaa
attaacacaccacagtgcttccttctgacgcccaagctgctgcctgatctggagtacagc
gatgcctgcagcattttgaacatcatgaacggcccatggatcgagaagccagcggaagtt
tggagcgccggggattgttggagggacgtgatgagatctgcagtgcattga
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