Setaria italica (foxtail millet): 101785005
Help
Entry
101785005 CDS
T02818
Name
(RefSeq) uncharacterized protein LOC101785005 isoform X1
KO
K13144
integrator complex subunit 7
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sita03041
]
101785005
Spliceosome [BR:
sita03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
101785005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
INTS7_C_plants
INTS7_N
IRX15_IRX15L_GXM
Motif
Other DBs
NCBI-GeneID:
101785005
NCBI-ProteinID:
XP_012701326
UniProt:
K3XDX3
LinkDB
All DBs
Position
V:5866867..5872408
Genome browser
AA seq
1203 aa
AA seq
DB search
MERIPAASAMDWSIDLDRGLRSRHQATRIRALDAASPRLRQLCACATSPAPAPVASSYGV
LPGEARVFAETMLLRLATEFRTADGAMRARIVRTLLAAAGGRGALAGACVAEPDQLLRRV
KAVYDTGSARDRALALRVFGCLAEVSKDSVHVRSLILSSLGASSALEVKSAIFAAGCICR
LSEDFSWIILEVFRRLICSQTSEPQVIMAAIKAFSKLDCTLAVIHRVHEVGKQMVLGTLE
DVFKYEMLYSLSRLVSKSIILFCDQVDLLLLFLNHDSTPMKSMVLKCMCFMFHRNTYHFS
VIRTVFGRLLPLIDDEDLSLDCKSYVLRILQKNFCGKASGIHHFDGSELSKLLLAAESYL
HSSSLEMQGTALEILVEVFCILKQVRPDLNMTILKGLPFAYAECQGATNNISLTSEENGM
DRPLYNIITMIVNYIISLVNQVISCEKKKVTSGSICMPSEWDKKYIAPFRLMVKLVTCYP
SAATVALGKLISVVKELSQINGRDYSEVAVTSVEPFQTIIALEELNTSNGNVELLATRIE
ASPIETDIGKGKLDSSKFDRKNKRSIMHDLTLCTLRFGNACHDVLCKTSGARYNLHDSIK
GLIECVHQNDSQYWSTYEAFHLIMCACIARDTCKIRDGNQEPGDSKEGPSFFLTPSVWIA
QELCALRMTKMLIKKQKYWEAYRSSMYCCRKGLWFTASFVFRKLADVFNPGSFSCWFKSL
LLFSAGEIEMKLLLFPSATIKLVGELKTDNDLSEELYCAETDLDSILSESQELHGHQATI
TGICGRTGLANDALESNAASDYEFFFQRWFISLRSSFLEMLTDILGILSANSSAYEGRED
HLNVSGEIIQGQILALASCSLRLSDLAKSYDLLAASHMDMDCHSSSSLARLAFMCSLLAF
CTAYSVDFSRACSDVESCKLPKRFSYALVLQDLHGRVDGLDRQIVSKLQQFMPTSFDAQV
CLQSSGRMNCSGDLEKDSYSLCHFAVASLLSAHGNAKANGMTRGLQLLSTILQKFMELPF
VVPKYFFRVRPCLGAELYMFVSNPADKNEMSVEPGFQLSLTLCMQWKRLLERTAIRPMKL
YCILATSSAPCLDTAGTRRKQFGPHKTAEMVELNSKLLWYLRSDLRKGRDEKDSQSSSEM
VMAFARFEPADSGQGFSACLLNVSSFPEGLYQIKWHACCVDQNGSYFSLLPLTDGVVFSV
RKS
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atggagaggatcccggcggcatccgccatggactggagtatcgacctcgacaggggactc
cgctcccgccaccaggccacgcgcatccgcgccctcgacgccgccagcccgcgcctccgc
cagctctgcgcttgcgccacctcccccgcccccgcgcccgtcgcatcctcgtacggcgtc
ctgcccggggaggcgcgcgtcttcgcggagaccatgctcctccgcctcgccaccgagttc
aggaccgccgacggcgccatgcgggcccgcatcgtcaggaccctccttgccgctgcgggg
ggacgcggcgcgctggccggggcttgcgtggcggagcccgaccaattgctcaggagggtc
aaggcggtgtacgacacggggagcgcgcgggacagggcactcgcgctgcgcgtgttcggc
tgcctcgccgaggtctccaaggacagcgtgcacgtccgctctttgattctctccagcttg
ggcgcctcaagtgctctcgaggtcaagtcagcaatctttgcggctggttgcatttgtcgt
ctgtctgaggacttctcatggataattcttgaagtgttccgaagattgatttgttctcag
acatcagaaccacaagttatcatggcagcaattaaggctttctcaaagcttgattgtacg
ttggctgttatccatagagttcatgaggttggaaagcagatggttctaggcacactggaa
gatgtattcaaatatgaaatgctctattcgctctcaagattggtatccaagtcgatcatt
ttgttctgcgaccaggtggatttactgttactgtttctgaatcatgattccactcctatg
aagtctatggtgttaaaatgcatgtgttttatgtttcacagaaatacctaccatttttca
gttattaggactgtttttggcagattgttgccactaattgatgatgaggatctttcactt
gactgtaagagctatgtgttaaggattctgcagaagaatttctgtggtaaagcgtcaggc
attcatcatttcgatggttctgaattatctaagcttcttctggctgctgaaagttattta
cattcttcttccttggagatgcaaggcactgctctagaaatacttgtggaagtcttttgc
attctcaagcaagtgaggccagatttgaacatgaccattcttaagggtttaccatttgca
tatgctgagtgccaaggagcaaccaacaacatatcactaacttctgaagaaaatggtatg
gacagacctctgtataatatcataacaatgattgtgaattatattatatctctggtcaat
caagtaatcagctgtgaaaagaaaaaagtcactagcggaagcatctgcatgccatctgaa
tgggataagaaatatatagctcctttcagacttatggtgaagcttgtcacatgctaccct
tctgcggctactgttgctcttggtaaactaatcagtgtggtaaaagaactatctcaaatt
aatggccgtgattactctgaagttgccgttacctctgttgaaccattccagacaattatt
gctcttgaggaattgaacacctcaaatggcaatgttgaacttttagctacaaggattgaa
gcttctcccattgaaacagacattggtaagggaaaattggattcctccaaatttgaccgc
aagaataaaaggtccattatgcatgatcttactctttgcacgctcaggtttggaaatgct
tgtcacgatgttctttgtaagacatctggtgctagatacaatctccatgatagcattaag
ggtctaattgagtgcgttcatcagaatgactctcaatactggagcacatatgaagccttc
catctgataatgtgtgcttgtattgcccgggatacttgtaaaatcagagatgggaatcag
gaaccaggtgattcaaaagaggggccaagttttttcttaactccttctgtttggatagct
caggaattatgtgcacttcgaatgaccaaaatgcttataaaaaaacagaaatactgggaa
gcttataggtcttccatgtactgttgtcgtaaaggtctctggttcactgcttcctttgtc
ttcaggaaactggcagatgtatttaatccaggctctttcagttgttggttcaaatcattg
ctacttttttctgctggggaaattgagatgaagctattactttttccctcagcaactata
aagttagttggtgagctaaaaacagacaatgatcttagcgaggagctttactgtgctgaa
acagatcttgacagtattctcagtgaatctcaagagttgcatggtcaccaagcaacaatc
actggtatttgtggcagaacaggcttagctaatgatgctctagaatcaaatgccgcctca
gattatgaattctttttccagagatggttcattagcctcagatcatcatttcttgagatg
ttaactgacattcttggtattcttagtgcaaattcttctgcatatgaaggaagagaagat
catttaaatgtatctggagagattatccaaggccaaatacttgctttggctagttgctct
ttaagattaagtgatctggcaaagagttatgatctccttgctgcatcccatatggacatg
gattgtcatagctctagtagtttagccaggcttgctttcatgtgctcgctgttggcattt
tgtactgcatattctgtggatttctcaagagcatgtagtgatgtagagtcatgcaagctt
ccgaagaggttttcttatgctttggtcctacaagatttacatggaagagtagatgggttg
gacaggcagattgtttccaaactgcaacagttcatgcccacttcttttgatgcacaggtc
tgtttacagtccagtggacgaatgaactgttctggagatcttgaaaaggattcatattct
ctttgccattttgccgtggcatcgttgctttccgcacatgggaatgctaaagctaatgga
atgacaagagggttgcaacttctgtccaccattttgcagaagtttatggaattgcctttt
gtggttcccaagtacttcttcagagtaaggccttgccttggcgctgaactttacatgttt
gtttcaaatcctgcggacaaaaatgaaatgtcggtagagcctggtttccagttgtctctt
actctctgcatgcagtggaagcgtttgttagagagaactgccattcgccccatgaaattg
tactgcattctagccacaagctcggcaccctgcttagacacagcaggaacaagaaggaag
cagtttggaccgcacaagactgccgaaatggttgagcttaattccaagctgctgtggtac
ttaaggagtgatttgaggaagggcagggatgagaaggattcccagtccagctcagagatg
gttatggcctttgcacgcttcgaaccagctgatagcgggcagggattctcggcttgcttg
ctgaatgtctcctcgttccctgaaggtttgtatcagataaagtggcacgcgtgctgtgtc
gaccagaacggctcctatttcagcctcctgcctctgaccgatggtgtcgtcttctctgtc
cggaagtcctga
DBGET
integrated database retrieval system
