Setaria italica (foxtail millet): 101785252
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Entry
101785252 CDS
T02818
Name
(RefSeq) ATP-dependent RNA helicase DEAH13
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sita03009
]
101785252
Enzymes [BR:
sita01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
101785252
Ribosome biogenesis [BR:
sita03009
]
Eukaryotic type
90S particles
Helicases
101785252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
DHX37_C
HA2_N
HA2_C
AAA_22
ATPase
nSTAND3
AAA_19
PhoH
TNP-like_GBD
Motif
Other DBs
NCBI-GeneID:
101785252
NCBI-ProteinID:
XP_022679097
LinkDB
All DBs
Position
IX:57732085..57739619
Genome browser
AA seq
1287 aa
AA seq
DB search
MEDSNALILPCKRKNKGQGKAKDGKKAKKEDPKMSKTKLKKLQKLEEEKRKKLLQAQSIE
ILQKHKISEDAYSLLHASGTIGQVETLKEKCRRAMQLSKAGLDVPEELSLFKRNDDQKFS
ENSDPVEHILPPKFVEPVKSEDPGRVHEKNMKNDSRKAMECQPKMDVGVSIPEPKTEEPS
DNGHLLANQKIQSSIPSCSGTELDLQDKEPGQGEAAMQECINPPIVVPVSRPHEVEKARR
DLPIIMMEQEIMEAIYENSIVILCGETGCGKTTQVPQFLYEAGFGTSDRADRRGMIGITQ
PRRVAVLATARRVSYELGLKLGREVGFQVRHDKLVGSNCSIKFMTDGILLRELQGDFLLK
RYSVIILDEAHERSLNTDILIGMLSRIIKGRKNLYVDQQDKIRSGVKIKPEDMISQLKVV
LMSATLQLKDFISNRRLFDVIPPAVKVPVRQFPVTVHFSKRTHDDYLGQAYKKVMSIHKR
LPPGGILVFVTGQREVDYLCKKFRRASKVQTAKKPEKVDGDDNGPFPEVDDKEILEAYDI
DRNKSEHPDDIFYSYDDDDDMDPGPNSFSSDNETESEMDTDTDDEESVTYETTEEDAPVL
SFLKDAENSSVLKASFGALSGISGVPESVEKSSDATSEEKSSPSVSCFSKCTERMPVSHG
RLRVLPLYAMLPASQQLQVFQDIPKGERLVVVATNVAETSLTIPGIQYVVDTGKEKVKNY
DHATGMSSYEVQWISKASASQRAGRAGRTGPGHCYRLYSAAAYGKDDLFPEFAEPEIKKI
PVEGIVLMLKFMGIHKVVNFPFPTPPNKESLVEAERCLKALEALYSHDDYDGKLTPMGKA
MAQYPMSPRHSRLLLTVIKILKSQQGFARSNFILGYAAAAASVLSFTNPFLKQLDECDIN
GESEEHNTNPEANDPCERKRRKKHNAMVREAQEKFSNPSSDALTIARALQFFELSENPVE
FCRINSLHLKTMEEMSKLRKQLLRLIFHHSKFCKEFAWNYGDSDDVEQAWRNESSKRPLQ
MNEEELLGQGICAGWADRVARRNHTYSRASGDDRKVRAIRYQSCALNDTIYLHRSSSVAQ
VAPELVVYSELLSTKRLYMHGVTTIKPGWLLKYAGSLCTFSAPLEDPKPYYDPMNDQVYC
YVSPVFSRHNWQLPLHSLPIKDNTSRLQVFVCALLKGDVLPCLRNAKDFLALSPSFAFGP
ASQRRVGDLLDRMHIKQKSKIGKKLIDSRAALRDAWNADPNFLYPEIKAWYQDKFHSQFD
LKWEQMHQEVLLEGHELFPKRSKKVKG
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atggaggatagcaacgccctgattttgccctgcaagaggaagaacaaggggcaggggaaa
gccaaggacggaaagaaagccaagaaggaggacccaaagatgagcaagactaagctaaaa
aagctgcagaaattggaggaggaaaagcgaaagaagctgctgcaggctcaaagcattgag
attttgcagaagcacaagatctcagaagatgcatattcacttctgcatgcttcagggact
attggtcaagttgagactttgaaagaaaaatgcaggcgtgccatgcagttgtccaaggct
ggtttggatgttccggaagaactctcgctattcaagagaaacgatgatcagaaattctct
gaaaacagtgaccctgtggagcacattttgccaccgaagtttgttgagcctgtaaaaagt
gaggatcctggtagggtacatgagaaaaacatgaagaatgattcaaggaaagctatggaa
tgccaaccaaagatggatgttggagtaagcattccagagcccaaaactgaggagcctagt
gataatggccacctgttggcaaatcagaaaattcagtcttcaattccaagttgctctgga
acagagctagatttgcaggataaagagccaggacaaggggaagctgccatgcaggagtgc
ataaatcctccaattgttgtgcctgtgtcaagaccgcatgaggttgagaaggcaaggaga
gatctcccaataataatgatggagcaggaaataatggaagctatctatgaaaattctata
gtaatcctttgtggagaaacaggctgcggtaaaactactcaggtccctcagttcctgtat
gaagctggctttggcacaagtgatcgagctgacagaagagggatgattgggatcacccaa
ccacgacgtgtcgctgttcttgccacagctaggagggtgtcctatgagttaggacttaag
ctggggagggaagttggttttcaagttcggcatgacaaattggtgggaagtaattgctcc
atcaagttcatgacagatggtattttgctgcgagagctccagggtgattttctgttgaag
cgctattcggtgatcatattggatgaggcacatgaaaggagcttgaacacagatatactt
attgggatgctttctagaattattaagggtcgcaagaatttatatgtagatcagcaggat
aaaatacgatctggagtgaaaatcaagccagaagatatgatcagtcagttgaaagtggtg
ctcatgagtgctactctacaattgaaggacttcatttctaataggagattgtttgatgta
attccaccagctgttaaggtacctgtgcggcagtttccagtaacagttcacttctcaaag
aggacacatgatgattatttagggcaagcttataaaaaggttatgtcaatccacaagagg
cttccaccaggtggaatccttgtatttgtcactggacaacgagaagtggactacttgtgt
aagaaattccgaagagcatccaaggtgcaaactgctaagaagcctgaaaaagttgatggc
gatgataatggcccgttcccagaagtagatgataaggaaattttggaagcatatgatatt
gataggaacaaatctgagcacccagatgacatattttattcatatgatgatgatgatgat
atggatcctgggccaaattctttttcttctgacaatgaaacagaaagtgaaatggatact
gatactgacgatgaagagtctgttacatatgaaaccacagaagaggatgctccagtatta
tcatttttgaaagacgctgagaactcatctgtgttgaaggcgtcatttggagctctgtca
ggaatatcaggagtgccagaaagtgttgagaaatcaagtgatgctacaagtgaagaaaag
tctagtccatctgttagttgtttcagtaaatgtacagaacgtatgcctgtatcgcatggt
agactccgtgtcttgccactttatgcaatgttaccagcttcacagcagcttcaagtgttt
caagatatacccaagggggaaagattagttgtggtggcaactaatgtcgcagaaacctct
ttaacaattcccggcatacaatatgtagttgatactgggaaagaaaaggttaagaattac
gaccatgctactggcatgtcaagttatgaagtccaatggataagcaaggcatcggcatcc
cagcgtgctggaagagctggaagaacagggcctgggcactgttaccgtctctactcagct
gcagcatatggtaaagacgatttatttcctgaattcgctgaacctgagattaagaaaatt
ccagttgaaggcattgtccttatgctcaagtttatgggtatccataaggttgtgaacttt
cctttccctacacctccaaacaaggaaagtttggttgaagctgagcgttgcttaaaggca
ttggaagcactttatagccatgatgattatgatggaaaacttacaccaatgggaaaagct
atggcacaataccccatgagcccacgacattctcgtcttcttctgacagtgattaagatt
ttgaagagccagcaaggctttgctagatctaacttcatactgggatatgctgctgctgct
gcatcagtgttgagttttactaatccatttctcaagcagttggatgaatgtgatattaat
ggcgaatcggaagaacataacacgaatccagaagctaatgatccatgtgaaaggaaaaga
cggaagaagcacaatgccatggttagagaggcacaggaaaaattttctaaccctagcagt
gatgctttaaccattgcccgtgccctacaattttttgagttgtcagaaaaccctgtggaa
ttctgcagaattaattcacttcatctcaaaacaatggaagagatgtcaaaattgagaaag
caacttctccgtttaatatttcaccacagcaaattttgcaaggaatttgcttggaattat
ggagattctgatgatgttgagcaggcctggaggaatgagtccagtaaaagaccattgcaa
atgaatgaagaggaacttcttgggcaaggaatctgtgctggatgggctgatagagttgca
aggagaaatcacacctattccagagcatcaggagatgatcgtaaagttcgagctattcgc
tatcaatcttgcgcgcttaatgataccatatatctgcaccgatcatcgtctgttgcccaa
gttgccccagagcttgtagtttactcagagctacttagtacaaagaggttatacatgcat
ggtgtaaccactataaagccagggtggcttttaaagtatgccggttctctctgcaccttc
tctgcaccattggaagatccaaaaccctattatgaccccatgaatgaccaagtctattgt
tatgttagtccggtcttttctcgacataattggcagcttcccttgcatagtttacctatc
aaagacaacaccagtcgcctgcaggtatttgtgtgtgctttgcttaagggggatgtcttg
ccatgtctaaggaatgcgaaagatttcctggcactgtcaccatcttttgccttcgggcct
gccagccaaagaagagttggagatcttcttgacaggatgcatattaaacaaaaatcaaag
attggtaaaaaattaattgacagccgagcagcactgagagatgcatggaatgctgatcca
aattttctctatcctgagataaaggcgtggtaccaggataaattccatagccagtttgac
ttaaaatgggagcagatgcaccaagaggttcttcttgaggggcatgagcttttcccaaag
aggtccaagaaagttaaaggctag
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