Setaria italica (foxtail millet): 101785535
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Entry
101785535 CDS
T02818
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita00040
Pentose and glucuronate interconversions
sita01100
Metabolic pathways
Module
sita_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101785535
Enzymes [BR:
sita01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
101785535
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
101785535
NCBI-ProteinID:
XP_004969212
UniProt:
A0A368R7V6
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Position
V:complement(29462318..29463871)
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AA seq
394 aa
AA seq
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MARVNACSLALLLSCCILSGAAEAAVYDVAGFGAKPDGRTDSSTAFADAWSAACRSLEPA
TVYVPHGEFLLSRAAFAGPCSSRVTVQIDGTLVAPSGYTSRGGSGDVWIVFDHVDGLTMS
GGTLDGRGPALWACKAAGHGGCPSGATSLTVLNSRDVVIRGLRSVDSELYHVVIDGCERV
AVEDVGIVAPGSSPNTDGIHVQASSGVTVTRASIQTGDDCVSVGPGTANLRVEHVSCGPG
HGISIGSLGKESEEAGVENVTVAGASFVGTENGLRIKTWGRAAVEGAYVRGVVFEHAFMH
DVRNPIIIDQNYCPNHICPHQSSAVKISDVRYTDIRGSSASQVAVKFDCSATNPCSGIGL
RDIKLTLDGGKPAEATCQHADGKASGYVEPPSCL
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcgtgaacgcttgttccctagcgttgctgctctcttgctgcattctgtcaggt
gctgcagaagcggcggtgtacgacgtcgccggcttcggagcgaagcctgacggccggacg
gactcgtccaccgcgttcgccgatgcctggtccgccgcctgccggtcgctggagccggcg
accgtgtacgtgccgcacggggagttcctgctcagccgcgcggccttcgcgggcccgtgc
tcaagcagggtgacagttcagatcgatggcacgcttgtcgcgccgtcaggctacaccagc
cgtggcggcagcggggacgtctggatcgtgttcgaccacgtcgacggcctcaccatgtcg
ggcggcaccctcgacggccgcggcccggcgctgtgggcgtgcaaggcggccgggcacggt
ggctgccccagcggcgcaacatcgctgacggtgctgaactcgcgggacgtggtgatccgc
ggcctgaggtcggtggacagcgagctgtaccacgtcgtgatcgacggctgcgagcgcgtg
gcggtggaggacgtcgggatcgtggcgccggggagcagccccaacacggacgggatccac
gtgcaggcgtcgtccggggtcacggtcacccgggccagcatccagaccggggacgactgc
gtctccgtcggccccggcacggccaacctgcgcgttgagcatgtcagctgcggcccgggc
cacggcataagcatcgggagcctggggaaggagagcgaggaggcgggcgtggagaacgtg
acggtggccggggcgtccttcgtcggcacggagaacgggctgcggatcaagacgtggggg
cgggcggcggtggagggcgcgtacgtgcgcggcgtcgtcttcgagcacgcgttcatgcac
gacgtgcgcaaccccatcatcatagatcagaactactgccccaaccacatatgcccccat
cagagctcggcggtgaagatcagcgacgtgaggtacacggacatccggggctcgtcggcg
tcgcaggtggcggtgaagttcgactgcagcgcgaccaacccgtgcagcgggatcggcctc
cgggacatcaagctcaccttggacggcggcaagccggcagaggcgacttgccagcacgcc
gacggcaaggcttcaggctatgtcgagcctccaagttgcttgtga
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