Setaria italica (foxtail millet): 101785776
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Entry
101785776 CDS
T02818
Name
(RefSeq) vacuolar protein sorting-associated protein 52 A isoform X1
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sita04131
]
101785776
Membrane trafficking [BR:
sita04131
]
Protein recycling
Others
EARP complex
101785776
Endosome - Golgi transport
Tethering complex
GARP complex
101785776
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
Cep57_MT_bd
Motif
Other DBs
NCBI-GeneID:
101785776
NCBI-ProteinID:
XP_004984004
UniProt:
K4A6H7
LinkDB
All DBs
Position
IX:complement(42309655..42318952)
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AA seq
700 aa
AA seq
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MEAVSAAEALDGHKDRFDLGVFVGDLALDEEVTSDDECLEGLQQELDDCKNDQEVANILA
NGIKLREYTKGVENNIRQVELDSIQDYIKESENLVSLHDQIRDCDNILSQMEMVLTGFQT
EIGSISSEIKVLQEKSMDMGLKLKNRKAAESKLSKFVEDIIVPPRMIDIIVDGEVNDEYM
KTLETLSKKIKFIDADPMVKSSKALKDVQPEVERLRQKAVSKIFEFVIQKFYALRKPKTN
IQILQQSVLLKYKYTIIFLKEHAKEIYAEIRAAYIDTMNKVLSAHFRAYIQALEKLQMDI
ATSTDLLGVETRSTGFLFSIGKESLKTRSSVFALGERINILKEIDQPALIPHIAEAKSQK
YPYEVLFRSLQKLLIDTATSEYLFTDDFFGEESIFHDIFAGPIQVVDEYFNAVLLNCYDA
IGIMLMIRIIHQHQLIMFKRRIPCLDSYLDKVNMSLWPRFKMVFDLHLNSLRNANIKTLW
EDDVHPHYVTRRYAEFTASLVHLNVEHGDGQLDLNLERLRMAIEDLLVKLAKMFSKPKLQ
TIFLINNYDLTIAILKEAGTEGGKAQLHFEEVLKSNIAIYVEELLQEHFSDLIRFVKTRP
ADETASSSEKISVAEVEPLVKDFASRYKAAIEQMHKDVITSFSNFLCGMEILRAALAQLL
LYYTRLTECVKRINGGSALNKDLVSISSILFEIKKYSRTF
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtctccgccgcggaggccctcgacgggcacaaggacaggttcgatctcggg
gtcttcgtcggcgacctcgccctcgacgaggaagtcaccagtgatgacgagtgcctggaa
gggctgcagcaggagctcgacgactgcaagaatgatcaggaagtcgcaaacatcctggct
aacggcatcaaactgcgcgagtacacaaaaggtgtcgagaataacatacgccaagtcgag
cttgattccatacaggattacattaaggaaagtgaaaacctagtttcgctgcatgatcaa
attcgcgattgtgacaatattttgtcccaaatggaaatggttctgactggattccagaca
gaaattggttccataagttcagagataaaggtccttcaggagaaatctatggacatggga
ttaaagctgaaaaatcgtaaggctgcagagtctaaattgtcaaaatttgttgaggatata
atagtacctccaagaatgattgacataattgttgatggagaggtcaacgatgaatatatg
aaaacacttgagactctgagcaaaaagatcaagttcattgatgctgatcctatggttaaa
tcatccaaggctctaaaagatgttcagcctgaagttgagagactacggcagaaagctgtc
tcaaagatttttgagtttgtcatccagaagttctatgccttgagaaaaccgaaaactaat
attcagattctacagcagagtgtccttcttaaatacaaatacacaataattttccttaag
gaacatgctaaggagatatatgcagaaattcgtgcggcatatattgataccatgaataag
gtgctaagtgcacattttcgtgcatacatacaagcattagagaaactacagatggacata
gctacttccaccgacttacttggcgttgaaaccagaagtacaggcttccttttctccatt
ggaaaagaatctctaaaaacccgttcttcagtgtttgctttgggtgaacgaataaacata
ttaaaggaaatcgatcagccagcattgatacctcatatagctgaagcaaagtcacaaaaa
tatccatatgaagttcttttcagaagcttgcagaaacttcttattgacacagccacttcc
gagtacctgttcactgatgatttcttcggtgaagaatccatattccatgatatatttgca
ggaccaattcaagtggttgatgaatatttcaatgctgtactcctgaactgttatgatgca
atcggaataatgcttatgatcagaataattcatcagcaccagctcatcatgttcaagcgg
cgaatcccatgtttggactcttacctagacaaggttaatatgtcactctggcctcgcttc
aagatggtgtttgacttgcatttgaacagcttgcgaaatgcaaatattaagactctttgg
gaggacgatgtccatccacactatgtcacaaggagatatgctgaatttacggcttctcta
gttcacctcaatgttgaacatggggacggtcagcttgatcttaatttggagcgattgcgg
atggctattgaggacttgctcgttaagttggccaagatgttcagtaaaccgaagctgcaa
actattttcttaataaacaactatgatttaacaattgccattctgaaggaagctggaaca
gagggtgggaaggcacaactccacttcgaggaggttcttaagagcaacattgcaatatat
gtggaagagttgctccaggagcatttcagtgatttgatcagatttgtcaaaactcgtcca
gcggatgaaacggctagtagttcagagaaaatcagcgttgccgaagttgaaccactggta
aaggattttgcgagccggtacaaggctgcgattgagcagatgcacaaagatgtgatcaca
tctttcagcaacttcctgtgtgggatggagatcttgagagcggcgctcgcgcagctccta
ctctactacaccaggctcaccgagtgtgtcaagaggatcaatggcggttctgctctcaac
aaggacctggtgtccatatcctccatcctgttcgaaatcaagaagtattctaggaccttt
tag
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