Setaria italica (foxtail millet): 101785779
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Entry
101785779 CDS
T02818
Name
(RefSeq) putative tRNA pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sita03016
]
101785779
Enzymes [BR:
sita01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
101785779
Transfer RNA biogenesis [BR:
sita03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
101785779
Prokaryotic type
101785779
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
101785779
NCBI-ProteinID:
XP_004984444
UniProt:
K4A8J3
LinkDB
All DBs
Position
IX:complement(46947163..46951295)
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AA seq
519 aa
AA seq
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MATAAAAATSSWLLRRPISSILLARRATPRVLRTTIFYSSSASAPAAPPPPPPPLPSDTS
AGDGGCGMRWESARKKRVVLRVGYVGTEYRGLQKQRELSVDSTIESVLESAIFKAGGILE
SNYGKLQKVGWERSSRTDKGVHSLATMISLKMEIPDRAWENDPDGISLASFINSNLPNNV
RVFSILPAQRSFDVRRECLYREYFYLLPAETIGIKDGCSSEEVQEHLSEFNSILKGFEGN
HPFHNYTARAKYRKVLAGSHRRVKGACLPLKSMSSETGMEENSSEDNTPSDHDEDLNISS
MIDSGVEDNCLNDVAKHFGNQVQIQARWLYEPDESDRLNASHFRDIITCSCGELQSSSGI
QFVELTICGVSFMLHQIRKMVGTAVAVKRGLLPKDIIELSLAKFSRIVLPIAPSEVLILR
DNSFCTKNKEGRLVRPGIESMNKSAEVRKGVTEFYKAALLPELAKFLDPSMPPWKEWVEN
LDQFATIPDSQLDEVREAYKIWKADYDRVKMAKKSADGV
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgccgccgccgctgcgacgtcgtcgtggcttctccggagaccaatctcctcc
atcctcctcgctaggcgcgcgacccctagagtcctgcgtaccaccatcttctattcctcc
tccgcatccgcccccgccgcaccaccgccgcctccgcctccgcttccgtctgacacctcg
gccggcgatggaggctgcgggatgagatgggagtcggcgcggaagaagagggtggtgctc
cgcgtcggctacgtcggcaccgagtaccgaggccttcaaaagcagcgggagcttagcgtg
gactccaccattgagtcagtcttggaatctgccatcttcaaggcaggaggcattcttgag
agcaattatggaaaacttcaaaaggttgggtgggagaggagtagccgaactgataaaggg
gtacattcgctggctacgatgatctcccttaaaatggaaatccctgatagagcgtgggaa
aatgatcctgatggcatttctcttgccagtttcattaactcaaatttgccgaacaatgtc
agagtttttagtatcttacctgcacaaaggagttttgatgtaaggagggagtgcttatac
cgtgagtacttctaccttcttcctgctgaaactattggaattaaagatggttgtagttct
gaagaagtgcaagaacacttgtcagaattcaacagcatactgaaaggtttcgagggaaac
catccatttcataattacactgcacgggccaagtacagaaaagttcttgcgggaagtcac
cgaagggttaaaggagcatgtttgccgttgaagtccatgtcttctgaaacgggtatggaa
gaaaactcttctgaagacaacactccttcagaccatgatgaagacttgaatatttcatca
atgattgattctggtgtcgaagacaattgtttgaatgatgttgccaaacattttgggaac
caggtgcagattcaagctaggtggctatatgagcctgatgagagtgatagactaaatgct
tcacatttcagagatattattacatgttcatgtggagaattgcagagttcatcaggaatt
caatttgtggaattgaccatatgcggagtatctttcatgctacatcagatccggaagatg
gttggaactgcagtggcagtgaagcgtggattactacccaaagatatcatagaattgtct
ctagcaaagttttctagaatcgttctaccaatagccccttcagaagttctgatccttaga
gataatagtttctgcacaaaaaacaaggaagggagacttgttcgccctgggatcgagtca
atgaacaaatcggcagaagtcaggaagggggttacggaattctacaaggcagctctcctg
cctgagctagcaaaattcttggatccatctatgccaccatggaaggaatgggtggagaac
ttggaccagttcgccaccatacctgattcgcagctggatgaagttagggaggcttataaa
atatggaaggctgattatgacagagtgaagatggctaaaaagagtgctgacggcgtctaa
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