Setaria italica (foxtail millet): 101785859
Help
Entry
101785859 CDS
T02818
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 57
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sita03009
]
101785859
Enzymes [BR:
sita01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101785859
Ribosome biogenesis [BR:
sita03009
]
Eukaryotic type
90S particles
Helicases
101785859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25_NTPase-like
Cas3-like_C_2
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
101785859
NCBI-ProteinID:
XP_004958532
UniProt:
K3ZS55
LinkDB
All DBs
Position
II:47104968..47108924
Genome browser
AA seq
540 aa
AA seq
DB search
METSKLSSALFAGTHFNRKRFAADFARFHQGPTPSPAAPSALSPEKKRKRKSGKAKAKNN
KKKRAEAAAASSSDVVEGFNVFKGLVGKNDELRSEKVVIGKDEDSVSVRRRKEIEREIER
AAVLRKRFDIHIAGQNVPAPLESFEELISRYGCDSYLVGNLSKLGFQEPTPIQRQAIPIL
LSGRECFACAPTGSGKTLAFLFPLLMKIKPGSKGGVKAVILCPTRELAAQTVRECKKMAK
GRKYYIKLMTKDLSKSGNFKDMHCDILVSTPLRLDHAVKKRDLDLSSVEYLVLDESDKLF
ELGFVEVIDSVVEACSNPSIIRSLFSATLPDSIEALARTIMHDAIRVIVGRKNSASSLIK
QKLIFAGTERGKLLALRQSFQESLNPPVLIFVQSKDRAKELYKELAFDDVRADVIHADLS
EEQRQDAVDNLRAGKTWVLIATEVIARGMDFKGVNCVINYDFPESAAAYIHRIGRCGRAG
RSGEAITFFTEEDKPFLRNIANVLVSSGCEVPSWIMALPKLKRMKHRVDRDPISTLPDED
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggagacctcgaagctctcgtcggcgctcttcgccggcactcacttcaaccgcaagcgc
ttcgccgccgactttgcgcggttccatcaaggcccgactccctcacccgccgccccctcc
gcgctgtccccggagaagaagcggaagcgaaagagcggcaaggcgaaggcgaagaataat
aagaagaagcgagcggaagcggctgccgcctcgtcgtcggatgttgtggaggggttcaat
gtgttcaagggattggtgggtaaaaatgacgagctgcgttctgagaaggtggtgataggg
aaggatgaggattcggtgtctgtgaggcggcggaaggagattgagagggaaatcgagagg
gctgcagttcttcggaagaggtttgatattcacattgctggacaaaatgttccagcacca
cttgagagctttgaagaactgatttcaagatatgggtgtgattcctatctggttgggaac
ttgtcaaaacttgggtttcaagaacctacaccaatacaaaggcaggccattcccattctt
ctttcggggagggaatgctttgcttgtgcacctactggttctggcaagacactggctttc
ttgtttccacttcttatgaaaattaagccagggtctaaaggtggtgttaaagctgtgatt
ctttgcccaacgagagaattggccgcacaaactgtgagagaatgcaagaagatggctaaa
ggaaggaagtactatattaaattgatgaccaaagatctctccaaatcagggaatttcaaa
gatatgcactgtgatatccttgtttccaccccgcttcgtttggaccatgctgtaaagaaa
agagaccttgatttaagtagtgtggaataccttgtcttggatgaatctgataaacttttt
gagcttggatttgttgaagtgattgattcagttgttgaagcctgttccaatccttcaata
attcggtctttgttcagtgccacattgcccgattcaattgaggctcttgcacgcactata
atgcacgatgccattcgagtcattgttggaagaaagaattcagcttcctcactgattaag
caaaaattgattttcgctggaactgagagggggaagttgctagctcttcggcaaagcttt
caagagtctctcaatccaccagtattgatctttgtccaaagcaaagacagagcaaaagag
ctttacaaagaactggcatttgatgacgttagggctgatgtaattcatgcagacctcagt
gaggagcagcgtcaggatgctgttgacaacttgagagctggaaagacctgggtactgata
gcaacagaagtcattgctcggggaatggatttcaaaggtgtaaactgtgtgataaactac
gattttccggagtcagctgctgcctatattcacaggataggacgatgcggaagagccggt
agatctggggaggccatcacgttcttcacagaggaggacaagccattcttgaggaatatc
gcgaacgtgctggtatcttcaggatgtgaagttccttcctggataatggcattgccgaag
ctcaagcgaatgaagcacagggtggatagggacccaatctccaccttaccggatgaagat
taa
DBGET
integrated database retrieval system
