Setaria italica (foxtail millet): 101786221
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Entry
101786221 CDS
T02818
Name
(RefSeq) AP-4 complex subunit epsilon
KO
K12400
AP-4 complex subunit epsilon-1
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
101786221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sita04131
]
101786221
Membrane trafficking [BR:
sita04131
]
Endosome - Golgi transport
Others
AP-4 complex
101786221
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Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
HEAT_2
Cnd1
INTS1_R4
HEAT
HEAT_EZ
PIK3R4-like_middle
PDS5
HEAT_GCN1
NPHI_C
DUF4290
tRNA-Thr_ED
Motif
Other DBs
NCBI-GeneID:
101786221
NCBI-ProteinID:
XP_004971044
UniProt:
K3XE65
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All DBs
Position
V:complement(44677981..44686088)
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AA seq
970 aa
AA seq
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MEQLRTIGRELAMGSQGGWGQSKEFLDLVKSIGEARSKAEEDRIIARELEHLKRRLADPD
VPRRKMKELLLRLVYAEMLGHDASFGHIHAVKMTHDESLPLKRTGYLAVALFLDERHDLV
ILVVNTIQKDLRSDNYLVVCAALTAACRLIGEEAIPAVLPQVVELLAHPKEAVRKKAVMA
LHRFYQRSPSSVSHLVSNFRKRLCDNDPGVMGATLCPLYDLILEEPNSYKDLVVSFVNIL
KQVAERRLPTSYDYHQMPAPFIQIKLLKILAVLGSGDKQASGHMYTVLGDIFRKGDTASN
IGNAILYECICCISSIFPNPKMLEAAAETTSKFLKSDSHNLKYMGIDALGRLIKINPDIA
EEHQLAVIDCLEDPDDTLKRKTFELLYKMTKSTNVEVIVDRMIEYMINITDHHYKTEIAS
RCVELAEQFAPSNQWFIQTMNKVFEHAGDLVNIRVAHNLMRLIAEGFGEEDEGADSQLRS
SAVDSYLRIVGEPKLPSSFLQIICWVLGEYGTADGKYSASYIIGKLCDVAEAHLTDDTVK
AYAISAILKIFAFEVTLGRKIDMLPECQTLVDELSASHSTDLQQRAYELQALLGLDKHAV
ESVMPADASCEDIEVDRNLSFLNSYVHQALENGAAPYIPESERSGAISVGSYKSQEQQET
SAHTLRFEAYEMPKPSMALATSQASMSAPPTDLVPVPEPGYYKEDHQTSRSQPSGDAVSG
EFGVKLRLDGVQKKWGRPTYSSSTPSSSASSQQATNGASHSDGGGATSSQARESTYGSKR
QQGTEISAEKQRLAASLFGSAAAKADRKAQASRKTAKESASTEKASASSAASQPIKEQVI
PAVPPPDLLDLGDEPVSSSPPIADPFSQLEGLLGPASATPVVSGTPAASTSNAQDLMSIF
SDDVPTGATSGSADPAVGDANLMSSHKGATAAAAKKGPSLQDALQKDATARQVGVTPTGN
NPNLFKDLLG
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atggagcagctgcggacgatcgggcgggagctggcgatggggtcgcagggcgggtggggg
cagtccaaggagttcctcgacctcgtcaagtccatcggcgaggcgcgctccaaggcggaa
gaggaccgcatcatcgcgcgcgagctcgagcacctcaagcgccgcctcgccgaccccgac
gtgccccgccgcaagatgaaggagctcctcctccgcctcgtctacgccgagatgctcggc
cacgacgcctcctttggccacatccacgccgtcaagatgacccacgacgagtcgctcccg
ctcaagcggaccgggtacctcgccgtcgcgctcttcctcgacgagaggcacgacctcgtc
atcctagtggtcaacaccatccagaaggacctcaggtccgacaactatctcgtcgtctgc
gcagcgctcaccgccgcgtgccgcctcatcggcgaggaggccattcccgccgtgctgcca
caagtcgtagagctgcttgcgcacccaaaggaggccgtacggaagaaggccgtcatggcg
ctgcaccggttttaccagcgatccccctcctccgtttcccaccttgtctccaacttccgc
aagaggctctgtgacaatgatcctggagttatgggtgcaaccctatgccccctctatgac
ctgattttggaggaaccaaattcatacaaggatctggttgttagttttgttaacatcctc
aaacaagttgcggagaggaggcttccgacttcctatgattatcaccaaatgcctgcacca
tttattcagataaaattattgaagatactcgctgtgctgggtagtggtgataaacaagca
agtggacatatgtacacagtgttgggtgacatatttaggaagggtgacactgcaagcaac
attgggaatgctatactgtatgaatgcatatgctgtatttcatccattttcccgaaccct
aaaatgctagaggctgcagctgaaacaacatcaaagtttctgaagagtgatagccataat
cttaagtacatgggcattgatgctcttggccggctaataaaaataaatccagatattgcg
gaagagcaccaattggctgttattgattgcttagaggaccctgatgacactttgaagcgc
aagacttttgagcttctttataagatgacaaagtcaacaaatgttgaagtcattgttgat
aggatgattgagtacatgatcaacataactgatcatcattacaagacagaaattgcatca
cgttgtgttgaactcgcagagcaatttgcacctagcaatcagtggtttatccagaccatg
aataaagtctttgagcatgctggagatcttgtcaacataagggtggcacacaatttgatg
cggcttattgctgaaggctttggtgaggaggatgaaggtgctgacagtcaactaagatca
tcagctgtagattcctatctccgcattgtgggagagccaaagcttccttcttcattcctg
cagataatatgctgggttttgggagaatatggaacagctgatgggaaatattcagcttct
tatattatcgggaagttgtgtgatgtggcagaggcccacctcacagatgacactgtcaag
gcatatgcaatctcggcgattttgaagatatttgcatttgaagttactcttggaaggaag
attgatatgctgcccgagtgtcaaacattggtagatgaattgtcagcttcacattcgaca
gacttgcagcaacgggcatatgaactacaggctttactaggcttggacaaacatgctgtt
gaaagtgttatgcccgcagatgcaagctgtgaagatattgaggtcgacagaaacctctcg
tttctaaacagttatgtgcatcaagccttggaaaatggtgcagccccttacattccggag
agtgagcgctcaggtgcgataagtgtgggcagctacaaaagccaagaacaacaggaaaca
tctgcccacactcttaggtttgaggcctatgagatgcctaaaccttcgatggcactagca
acatcacaagccagcatgtccgcaccacctactgacttggttccagttccagaaccaggt
tactataaggaagaccaccaaacatcaaggtcccagccttctggtgatgcagtttctggt
gagtttggtgtcaaacttcgccttgatggggttcaaaagaaatggggaaggccaacctat
tcctcttctacaccttcaagctcagcatctagccaacaagcaaccaatggtgcctctcat
tctgatgggggaggtgcaaccagttcacaggcgcgggagtccacgtatggttcaaagaga
cagcagggcacagaaatttcagcagaaaagcaacggcttgctgcttcactttttggttca
gcagctgctaaagctgataggaaagcacaagcttctcgaaagacagcaaaggagagtgct
tcaacggagaaagcatctgcgagtagtgcagcatcccagcccattaaagagcaagtaatt
cccgctgtcccaccacctgatctgctggatctgggtgatgaaccagtctcatcaagtcct
ccaatagccgaccctttctcacagctagaggggcttcttggaccagcatcagccactccg
gtggtttctggaactccagctgccagcacttccaacgcacaagatcttatgtcaatcttc
tcagatgatgtaccaactggagcaaccagtggatctgctgatcccgctgtaggtgatgct
aatttgatgagctcccacaaaggagcaactgcagcggctgcaaagaagggtcctagcctt
caagatgccttgcaaaaggatgcgactgcacggcaagtaggtgtgacaccaacagggaac
aatcccaatcttttcaaggacttgctaggctag
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