Setaria italica (foxtail millet): 101786440
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Entry
101786440 CDS
T02818
Name
(RefSeq) LOW QUALITY PROTEIN: lysine--tRNA ligase-like
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
101786440
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sita01007
]
101786440
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sita03016
]
101786440
Enzymes [BR:
sita01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
101786440
Amino acid related enzymes [BR:
sita01007
]
Aminoacyl-tRNA synthetase
Class II (A)
101786440
Transfer RNA biogenesis [BR:
sita03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
101786440
Prokaryotic type
Other AARSs
101786440
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
PGBA_C
CAF1A_acidic
Motif
Other DBs
NCBI-GeneID:
101786440
NCBI-ProteinID:
XP_012698496
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Position
IX:12252716..12259176
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AA seq
616 aa
AA seq
DB search
MADGAGSASGLEEKLAGLSTGGGGGDKQNPPPAGEGGEEPQLSKNAKKREEKRKKLEEER
RLKEEEKKNKAAAAAAACGTTQRASAADDDDMDPTQYYENRLKTLDSLKTAGVNPYPHKF
PVGISVAEYIEKYKSLSDGEKLDVTECLAGRIMNKRTSSSKLFFYDLYGGGMKVQVMADA
RTSELDEAEFTKYHSGVKRGDIVGICGYPGKSKRGELSVFPQKFVVLSPCLHMMPRQKGE
GSAAPASWTPGMGRNIENYVLRDQETRYRQRYLDLMVNHEVRHIFKTRSKVVSFIRKFLD
DREFLEVETPMMNMIAGGAAARPFVTHHNELNMRLFMRIAPELYLKELVVGGLDRVYEIG
KQFRNEGIDLTHNPEFTTCEFYMAYADYNDLMELTETMLSGMVKELTGGYKIKYHANGVT
NPPIEIDFTPPFRRIDMIKDLEAMANLDIPKDLSSDEANRYLIEACAKYDVKCPPPQTTS
RLLDKLVGHFLEETCVNPTFIINHPEIMSPLAKWHRSRPGLTERFELFVNKHEVCNAYTE
LNDPVVQRQRFEEQLKDRQSGDDEAMALDETFCTALEYGLPPTGGWGLGIDRLTMLLTDS
QNIKEVLLFPAMKPQE
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggcgcgggctcggcgtcgggcctagaggagaagctcgcggggctctccacg
ggcggcggcggcggcgacaaacagaatcctccgccggcgggtgagggcggagaggagccg
cagctctcgaagaacgcgaagaagagggaggagaagaggaagaagctggaggaggagcgg
aggctcaaggaggaagagaagaagaacaaggcggctgctgctgctgctgcctgtggaacg
actcagagggcaagtgctgccgacgatgatgacatggatcccactcaatactatgagaat
aggctcaagacactggattcgctcaagaccgcaggtgtaaacccctatccacataagttc
ccagttggcatctctgtagccgaatacattgagaagtacaagagcttgagcgatggggag
aagctggatgtgacagagtgtttagctgggaggatcatgaacaagagaacatcatcatct
aagctattcttttatgatctttacggtggtggcatgaaggttcaagtgatggctgatgcc
aggacctcagagttggatgaagctgaattcactaagtaccactcgggtgtgaagcgaggt
gatattgttggcatatgtggctatccaggaaaaagcaagcgtggcgagcttagtgtattc
ccacagaaatttgttgtgctctctccatgtcttcatatgatgcctcgacagaagggtgaa
ggaagtgcagcacctgcatcgtggactccaggaatgggtaggaacatcgagaattatgtt
ttgagggatcaggaaactcggtatcgtcaacggtatcttgatcttatggtaaaccatgaa
gtgaggcatatcttcaagacacgatctaaagttgtctcttttatccggaagtttctcgat
gatcgtgaatttttggaggtggagactccaatgatgaacatgattgctggtggagcagct
gcaaggccttttgtcacacaccacaatgaattaaacatgaggctttttatgcgcattgct
cctgagttatatctgaaggaattggttgtcggtggattggaccgtgtatatgaaattgga
aaacaattcaggaatgaagggattgatttaacacacaatcctgaattcacaacttgtgaa
ttttatatggcttacgcagattacaacgatttgatggagcttactgagaccatgttgtca
ggcatggttaaggagcttacaggtggctacaagataaaatatcatgcaaatggtgttaca
aatcccccaatagaaattgatttcacacctcccttcagaaggatagatatgattaaagat
ttggaggctatggccaatctcgatataccaaaagatctgtcaagtgatgaagctaatcgg
tatttgatagaagcatgtgcgaagtatgatgtgaaatgtccacctccccagacaacatca
cggttgcttgacaagttagttggccacttcttggaggagacatgcgtgaatccaacattt
atcatcaatcatccagagataatgagtccattagctaagtggcataggtcccgacctgga
ctgactgagagattcgagctatttgttaacaaacatgaggtgtgcaatgcgtacacagag
ttgaatgatcctgttgtccagaggcaacggtttgaggaacaactaaaggatcgtcaatct
ggtgatgatgaagctatggccttagatgaaacgttctgtactgcccttgagtatggtttg
ccaccgacaggtggttggggtttgggaatcgatcgcctcacaatgttgctaacagattcc
cagaacattaaggaagttcttctattcccggctatgaagcctcaagagtag
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