Setaria italica (foxtail millet): 101786715
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Entry
101786715 CDS
T02818
Name
(RefSeq) DNA helicase INO80
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101786715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sita03036
]
101786715
Chromosome and associated proteins [BR:
sita03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
101786715
INO80 complex (yeast)
101786715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
101786715
NCBI-ProteinID:
XP_004984358
UniProt:
K4A4T0
LinkDB
All DBs
Position
IX:complement(46233186..46244640)
Genome browser
AA seq
1509 aa
AA seq
DB search
MDPRRAPPRGGGANGGGGGGLSYSALFNLEPLLNFRVPVPEDLARYGHSSPNGSGSSEGH
GSLLDQYNGINDASHGLHRKRKRHLDGASDDDEADGYSNRITEEHYRTMLSEHVQKYRRS
KFKEGAFGSDPPRVASPQIKDKNGGKKTMKHRSDFRNVATLDEVEASHEYSGIECIKTHG
GFNKLVASLDSTYLDMGDNIRYSIPEGYDKLASSLNLPVSSDIRVEEHFLKGMLDLRTLA
AMLGTDQKFEASNRGGLSEPLPQFESLQERVKVQKFSLQVTEDPFAIPEGAAGRIRRFII
SEAGNLQVHYVKVLEKGDTYEIIERSLPKKQIIKKEPSVIVKEEAEKTYKLWQSLATKSI
PKHHRNFNALLKKRQVDAKRFSDSCQREVKLKVSRSLKLMRCAAIRTRKLARDMLIFWKR
VDKEQYELRKKEEREAAEALKREEELREAKRQQQRLNFLLSQTELYSHFMQNKTGASAPP
DEEDVPDEDEEEDPEEAQLKREALRAAQHAVSQQKMKTNAFDSEIVRLRQTSESGLPTDD
SSSMDPSKIDLLHPSTMPEKSSVQTPELFKGVLKEYQLKGLQWLVNCYEQGLNGILADEM
GLGKTVQAMAFLSHLAEDKNIWGPFLVVAPASVVNNWAEELIRFCPDLKILPYWGPERIV
LRKNINPKRLYRRDASFHILITNYQILVNEEKLLRRVKWQYMVLDEAQAIKSSSSQRWKT
LLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIEGHAEHGGAL
NEHQLSRLHAILKPFMLRRVKIDVIAEMTKKKEEIVPCKLSSRQQVFYQAIKNKISLNEL
LDGSRGNLNDKKLLSLMNIVMQLRKVCNHPELFERNEGSSYFYFADIPNSLLSPPFGELQ
DVYYAGKRNPITFEIPKLVYEGIIRNMEISGNGCGFRSGYLNRLFNIFLPSNIHCSAIPE
ASSSDVSVLSSGVFGFTRLSNISPVEASFLATSSLFERLAFLAMQLNRNYTDEIMDAFID
SEGPDVFSQNDSTSIRAVARLLSSTKTKPSFLRTKIGTGPGDCPYEALVLSHHDRLASNI
RLLRSAYAFIPPARAPPINVWCADRNFAYKFTDEMHDPWAKKLFLGFARTSEFNGPRQPA
GLHPLIQELHTDLPILEPMLQLPYRIFGSSPPMSNFDPAKMLTDSGKLHTLDMLLRRLRA
EGHRVLLFAQMTKMLDILEDYMNFRKFKYFRLDGSSAISDRRDMVRDFQNRNDVFVFLLS
TRAGGLGINLTAADTVIFYEIDWNPTQDQQAMDRTHRLGQTKEVTVYRLICKDTIEEKIL
QRAKQKNAVQELVMKGKHVQDDHLMRQEDVVSLLLDDTQIAHKLKEISMQAKDRQKKRRA
KGIKVDKEGDLTLEDLDDATAEAVDQDNATNKKKKSSHKKHSRTHDNDNVDKNGEAPTGG
DLTGSGHAENEQIAEPRPKRSKRLMKGMSDDKEPAAAADHEKPADEVENHTGHEYDDTEE
VQDGVKSTE
NT seq
4530 nt
NT seq
+upstream
nt +downstream
nt
atggacccgcgccgcgcccccccgcgcggcgggggcgccaacggcggcggcggcggcggg
ctctcctactccgcgctattcaacctcgagcctttgctgaacttcagggttcctgtacca
gaagatcttgcccgctatgggcatagcagcccgaatgggagtggaagcagcgaaggtcat
ggatctttgttggatcagtacaacggtataaatgatgcttcccatggcctgcatcggaag
cgtaaaaggcatctggatggtgctagtgatgatgatgaggcagatggatatagtaaccga
ataacagaggagcactaccgtacaatgctcagtgaacatgtccagaagtacaggaggtca
aagttcaaggagggtgcttttggttctgatcctcctcgtgtggcaagtccccaaataaaa
gacaaaaatggtggtaaaaaaactatgaagcacagaagcgatttcaggaatgttgcaaca
ttggatgaagtagaagcctcacatgagtacagtgggatagaatgtattaaaacccatggt
ggttttaataagcttgtagcgtcccttgattccacctatttagatatgggggataatata
cgctattcaattccggagggttatgataagttagcatcatcccttaatctgcctgtttct
tctgatatacgcgtcgaggaacacttcttaaagggcatgctagatttgcgcaccctagca
gcaatgcttggtactgaccaaaagttcgaggcttccaatcgtggtggattatctgaacct
ctgccacagtttgaatctcttcaggaaagggtaaaggtgcagaaattttctcttcaagtt
actgaggacccctttgcaatcccagaaggagcagctgggagaatacggaggtttattata
tcagaagctggcaatttgcaggttcattatgttaaagtcttggaaaaaggagatacatat
gagattatcgagcgtagcttaccaaagaagcaaataataaagaaggaaccttctgtaatc
gtgaaagaagaggccgaaaaaacttacaaactatggcagtctcttgctaccaaaagcatc
ccaaagcatcacaggaatttcaatgctttgctgaagaaacggcaagtagatgcgaagcgc
ttctctgatagttgccaacgggaggtaaaactcaaagtaagccgatcactgaaactgatg
agatgtgctgcaatacgtacaaggaagctggctagggatatgctgatattttggaaaaga
gtagacaaagagcagtatgagttaaggaaaaaagaagaaagagaagctgctgaagctttg
aagcgtgaggaggagctacgtgaagcaaaaagacagcaacagaggctaaactttctgctt
tcacaaacagagctttatagtcatttcatgcaaaacaagactggtgcctcagcaccgcct
gatgaggaagatgtccctgatgaagatgaggaagaagatcctgaggaggctcaattaaag
cgagaggccttgagagcagctcagcatgctgtctctcaacaaaagatgaagacaaatgca
tttgatagtgaaattgtgaggcttcgtcagacttccgagtctggtcttccaactgatgat
tcatctagcatggacccaagcaagattgatttattacacccttcaacaatgcctgagaag
tcatctgtgcagacaccggagttgtttaagggtgtattaaaagagtatcagttaaagggc
ttacagtggctggttaattgttatgagcaggggttgaatggcattcttgctgatgagatg
ggtcttggcaaaaccgttcaggctatggcattcctgtctcatttggctgaggacaaaaat
atatggggcccctttcttgtggtggctcctgcatctgttgtgaataattgggctgaggag
ttgattagattctgccctgacctaaagatacttccttactggggcccagagaggatagtt
ctccggaagaatatcaaccccaagcgtctttatcgcagagatgctagcttccacattctt
attacaaactatcagatacttgtgaatgaagagaagcttttgagacgtgttaagtggcaa
tacatggtgctggatgaggcccaggctataaaaagttcaagcagccagcgctggaagaca
ttgctgagctttaactgtagaaatcgtttgctgctcactgggacaccgatacagaataat
atggctgagttatgggcacttcttcatttcatcatgcccacactatttgacagccatgaa
caattcaacgagtggttctcaaagggtattgagggtcatgctgagcatgggggagctttg
aatgaacatcagcttagtcgactgcatgcaattttgaagccctttatgctgcgccgggtt
aagattgatgtcatcgctgaaatgaccaaaaagaaagaagaaattgtcccctgcaaattg
agttctcgtcagcaagtcttctatcaagccataaaaaataagatatctcttaatgagctg
cttgatggaagtcgcggcaatctaaatgataagaagttacttagcctgatgaatattgtc
atgcagctacggaaggtctgcaatcacccggagctgtttgagcgcaatgagggaagttct
tacttttactttgctgatatcccaaactcacttctctctcccccgtttggggaattacaa
gatgtatattatgccggcaagagaaatcctataacgtttgagattccaaagttagtgtat
gagggaatcatccgcaacatggaaatttctggaaacggctgtggatttcggagtggatat
ttgaacaggctgtttaatatatttttgcccagcaatatccattgttcagccattccagaa
gctagttcatcagatgtgtctgttctatcatctggtgtatttggctttacgcgtttatca
aatatatccccagttgaagcttccttcttggccacttcttcattgtttgagagactagca
tttttagcaatgcaattgaataggaactacactgatgaaattatggatgcattcattgat
tcagaaggtcctgatgtctttagtcagaatgattccacaagcattcgtgcagttgctcga
ttgctttcttctacaaagaccaaacccagttttcttagaacaaagattggaactggccca
ggtgattgcccatatgaagcactggtgctttctcatcatgacaggcttgcatcgaacata
aggcttcttcgttcagcatatgcttttattccgccagctagagcaccgcctataaatgtt
tggtgtgccgatagaaattttgcctacaagttcaccgatgagatgcatgatccttgggcc
aagaaactgttcctgggatttgctcgtacttccgagttcaatggtcctagacaaccagct
ggtctccatcctctgatacaagaactacatactgatttgcccatacttgagccgatgctg
cagctaccctataggatatttgggtcttctccgccgatgagtaattttgatccagctaaa
atgctcactgattctgggaagctccacaccttagatatgctattacggcgccttcgagct
gaaggtcatcgtgtgctcctttttgctcagatgactaaaatgttggacatccttgaggat
tacatgaatttcagaaaattcaagtacttcagacttgatgggtcttctgcaatctcggac
cgtcgtgacatggtccgagatttccagaataggaatgatgtatttgttttcttgttaagc
acaagagctggcgggcttggtataaatttgaccgctgctgatacagttattttttatgaa
attgactggaatccaactcaagatcagcaggcaatggatagaacacacagacttggtcag
acaaaagaggtaactgtgtatagacttatatgcaaagatactattgaggagaaaatattg
caaagagcaaagcagaaaaatgcagtgcaagagttggtcatgaaggggaaacatgtccag
gacgatcatttgatgagacaagaggatgttgtttcattacttcttgatgacacacaaatt
gcacataagttgaaagaaatatccatgcaggcaaaggatcgacaaaagaaaagacgagcg
aagggcatcaaggtcgacaaagaaggagatttaacactagaggacttggatgatgctact
gcagaagctgtagatcaagataacgcaaccaacaaaaagaaaaagagctcacacaagaaa
cattcgaggacacatgataatgacaatgtggacaagaacggagaggcccctacaggaggt
gatcttacagggagtggtcacgcagaaaatgaacaaattgctgaaccaaggcctaaaaga
tcaaaaaggctgatgaagggcatgagtgatgataaggaaccagctgctgctgctgatcat
gagaaaccagcagatgaagtggaaaatcacacaggccatgaatatgatgatacagaagag
gtgcaagacggagtgaaatctactgaatga
DBGET
integrated database retrieval system