Setaria italica (foxtail millet): 101786843
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Entry
101786843 CDS
T02818
Name
(RefSeq) ubiquitin receptor RAD23d isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03420
Nucleotide excision repair
sita04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101786843
09124 Replication and repair
03420 Nucleotide excision repair
101786843
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
sita03051
]
101786843
03400 DNA repair and recombination proteins [BR:
sita03400
]
101786843
Proteasome [BR:
sita03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
101786843
DNA repair and recombination proteins [BR:
sita03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
101786843
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
UBA_Ucp12
Rad60-SLD
UBA_RAD5A
Dsc3_N
STI1-HOP_DP
Rad60-SLD_2
TECR_N
Crinkler
Motif
Other DBs
NCBI-GeneID:
101786843
NCBI-ProteinID:
XP_004965183
UniProt:
K3XXA2
LinkDB
All DBs
Position
IV:11473488..11479040
Genome browser
AA seq
410 aa
AA seq
DB search
MKLNVKTLKGTSFEIEASPEESVAEVKKIIETTQGEVYPADQQMLIYQGKILKDDTTLES
NKVAENSFLVIMLSKAKASSSGASTAAAAKAPATPAQPAAPAVPVASVARSTPPQAPVAQ
AETAPPTAQPSPAAAAATTPAATVAASSDADVYSQAASNLVSGNNLEQTIQQILDMGGGT
WERDTVIRALRAAYNNPERAIDYLYSGIPENVEAPPVARAPASGQQTNPQAPPAQPAVAP
PVQPSAASAGPNANPLNLFPQGVPSGGANPAAGAGAGAGALDALRQLPQFQALLQLVQAN
PQILQPMLQELGKQNPQILRLIQENQAEFLRLVNESPEGGAGGNILGQLAAAMPQAVQVT
PEEREAIQRLEGMGFNRELVLEVFFACNKDEELAANYLLDHGHEFDEQQQ
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaacgtcaagaccctgaagggcaccagcttcgagatcgaggcgagccccgag
gagtcggttgctgaggtgaagaagatcatcgagaccacccagggtgaggtctaccccgcg
gaccagcagatgctcatataccaagggaaaattctcaaggatgacaccactttggaaagc
aacaaagtggctgagaacagcttcctcgttataatgctgtccaaggctaaggcgtcgtca
agtggagcttctaccgctgctgctgcaaaagcccctgcaacaccagcccaacctgctgcg
cctgcagtccctgttgcttcagttgcaagatcaacacctccacaagcacctgttgctcaa
gcagaaacggctcctccaactgcacagccttcacctgcagctgctgctgctactactcca
gctgctacagttgctgcatccagtgatgctgatgtgtacagtcaggcagcttcaaacctt
gtctctggcaacaatctggaacagactatccaacagattcttgacatgggtggtggtact
tgggaacgtgatactgttatccgtgctcttcgtgctgcgtataataaccctgagagggca
atagactacctgtattctggaattcctgagaatgttgaggccccgcctgttgctcgagca
cctgcatctggccaacaaacaaatccgcaagctccacctgctcagcctgcagttgcacca
ccagtgcagccatccgctgcctctgcagggcctaatgcaaatcctctaaacctttttcct
cagggtgttccaagtggtggtgcgaatccagctgctggtgccggtgcaggagctggtgcc
cttgatgccttgcgacagcttccacagtttcaggcactgcttcaattggtccaggctaat
cctcaaatcttacagccaatgcttcaagagctaggcaaacaaaacccacaaatcctacgg
ttgatccaggaaaatcaagctgagtttctccgcttggtgaatgaaagtcctgagggtggc
gctggaggaaacatactaggtcaactagcagcagcaatgccacaagcggtgcaagttact
ccggaggaacgggaggctatccagcggctcgagggaatggggttcaatcgtgagcttgtg
ctggaggtcttctttgcgtgtaacaaggatgaggagctcgctgctaactacctcctggat
catggccatgagtttgatgagcagcagcaatag
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