Setaria italica (foxtail millet): 105914489
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Entry
105914489 CDS
T02818
Name
(RefSeq) autophagy-related protein 18d
KO
K22991
WD repeat-containing protein 45
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sita04131
]
105914489
Membrane trafficking [BR:
sita04131
]
Autophagy
Other autophagy associated proteins
Others
105914489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_IFT140_2nd
BCAS3_WD40
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_RSE1_2nd
PEP5_VPS11_N
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR19_2nd
Beta-prop_IFT80_2nd
VPS11_N
DUF6817
Motif
Other DBs
NCBI-GeneID:
105914489
NCBI-ProteinID:
XP_012701805
UniProt:
K3XI91
LinkDB
All DBs
Position
V:9929168..9934075
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AA seq
417 aa
AA seq
DB search
MSSQVSTSRGLHPPGKLGAFESSHVWPLSAPTSQPGAGLGDDQDVRLLSVAWNQDCGCFA
AGTSNGFRIFNCEPFKETFRRDLKSGGFGIVEMLFRCNILALVGGGSNVQYPPNKVMIWD
DHQSRCIGEFAFRSDVRAVKLAKDYIVIVLERKIYVYNFTDLKLLYQIDTLSNPKGLCCL
SHHSNTSVLACPGVHQGHVRVEHFGLKMTKTIPAHDSNISCMALTMDGLLLATASTKGTL
IRIFNTMDGTRLQEVRRGLDKAEIYSIALSPNVQWLAVSSDKGTVHIFSLRVRVAGEDSS
NEQHTLEGPRMDHQNSSSSIDPLIQTNTGSNASSSLSFMRGILPKYFSSEWSFAQFHLPE
VTRYIVAFGAQNTVMMVGLDGSFYRCSFDQVNGGQMLQKEYFRFLKSDSPPFRTSAS
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgagctcacaagtctccacatcacgggggttacacccgcctggcaaacttggggcattt
gagtcgtcacatgtctggccgctgtccgcacctacgagccagcccggagcaggtcttggt
gacgaccaggatgtcaggctgttgtcagttgcttggaatcaggactgtggatgctttgct
gctggtaccagcaatggattcaggatcttcaactgcgagcctttcaaggaaactttcagg
agggaccttaagagcggcgggttcgggatcgtcgagatgctgtttcgttgcaacatcctt
gctcttgtaggcgggggctccaatgtgcagtatccgccgaacaaggtgatgatctgggat
gatcatcagagccgctgcattggagagtttgccttccgctctgatgtccgggctgtaaaa
ttggcaaaggactacattgtgattgtcctcgagcggaagatatatgtctacaacttcacc
gatttgaagctgctctaccagattgacactctgtcaaatcccaaaggactttgctgcctc
tcccatcattccaatacttcagttttagcatgccctggagtgcaccaggggcatgttcgg
gtggagcatttcgggctgaagatgacaaagacaatcccagctcatgattcaaacatctct
tgcatggcactgacaatggatggtctcctattggcaactgcgagcacgaagggcactttg
atcagaatattcaacacaatggatggcactcgcctacaagaggtacgcagaggacttgac
aaagctgaaatatatagcattgcgctgtcgcccaatgttcagtggttggcagtgtccagc
gacaaaggaactgttcatattttctctctgagagtcagagttgctggggaggattcaagc
aatgagcaacacactcttgaaggtccacggatggaccaccagaactcttccagttctatt
gatcctcttattcagacgaacactgggtccaatgcgagttcatcactgtctttcatgaga
gggatcctgccaaagtatttcagttcagagtggtcatttgctcaattccatctacctgaa
gtcacacgctacatagtagcatttggtgcacagaacaccgtaatgatggttggcctggat
ggcagcttctacaggtgcagctttgaccaagtgaatggagggcagatgttgcagaaggaa
tatttccggtttctgaagtctgacagcccacctttcaggacctcagccagctga
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