Setaria italica (foxtail millet): 106804406
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Entry
106804406 CDS
T02818
Name
(RefSeq) uncharacterized protein LOC106804406
KO
K17302
coatomer subunit beta'
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sita04131
]
106804406
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sita04147
]
106804406
Membrane trafficking [BR:
sita04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
106804406
Exosome [BR:
sita04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
106804406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
WDR55
EIF3I
PEP5_VPS11_N
Beta-prop_TEP1_2nd
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
106804406
NCBI-ProteinID:
XP_022683168
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All DBs
Position
VI:6083935..6094929
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AA seq
712 aa
AA seq
DB search
MPGANYSSISHEHWQHMIKRVDELAKSCGDDDQHKRPNINELLCKLDEIESEIEMVIRVN
GTSIDQEPLHVHPRKLVWPLAANNTMPFSLHLTNKSTDDHFAFMFLDFGGVASSCSILGN
KGVIPPQSTWGIVLHLQLQAGEPAVSEKQGKEMVIVRSTVVEKGFHSNDITVDMFKRHLS
VHDIELEVIFVEPPQSQPLQLYEFDHKLQLDANEGTSHGTTQTCPDESIMTELLDIYPFE
VGYPPKPEKYCTRTIHLTNTTEDTVEFWMVPSANARYYGYEGGYQAGFVPPQSTYAVRWV
LWNEVSEPTITESFQILMVTRADMSHLSSGVIRYPGDFHEQVFNAARDKGGKAHRACLFV
DNNSAPDKNYHRYEHALLTKYFGEITSMDVHPTTPLVLTGHQNFVCIWRIKKRQNHATEH
ARGFKDAMDFVVKFIARMQWVLSGDKTGKVNVYTTELKLLHTFTAHSDRVISIAVHPSHP
YVLTSSDDLLIKLWNWDNAWTCTREFQGHLNPATQVVFNPNDNADSFASCSRASYDCGRP
GNVKIWRIDSTNPETDLYGGFRAIDWSAPVKDGQYLVAVVDQGYTEIWDMEKQRRVHDII
CNGFHTQVACHPTLPIIVTGEEKGVTRIINLNTFRVEYIIPAVNDPLIALGFSDIAGYKS
LMIGRKNMVSHVVIDLETVASPHRPRFWHDNNAKQETERMHSSHACMEGAKD
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgcctggcgctaactattcaagtatatcacatgaacactggcaacatatgataaaacgt
gttgacgaattagctaaaagttgtggggatgatgaccaacataaaagacctaatattaac
gagttactttgtaagctggatgagatagaatccgagattgaaatggtgattcgagtgaat
ggaacttcaatagaccaggagcctcttcatgtccacccccgcaaactcgtctggcccttg
gcggcaaacaataccatgcctttctcactacatctgaccaacaagagcacagatgatcat
tttgcttttatgtttctggatttcggcggggttgcatcctcctgctccatcctaggtaac
aaaggagtcattccaccccaatcaacgtggggaatcgtcctacacttgcaactacaagcg
ggggagccggcagtatcggagaagcagggtaaggaaatggtcatcgtgcggagcaccgtt
gtggaaaagggcttccatagtaacgatatcactgtggacatgttcaagaggcaccttagt
gtgcacgatatcgagttggaagttatttttgtggaaccaccccaatcacaacccctccaa
ctatatgagtttgatcataagctgcagttggatgcaaacgagggaacaagccatggaacc
acacagacatgccctgatgagtccattatgactgagctgttagacatctacccgttcgag
gtcggatacccgcccaaaccagagaagtactgtacgcgcacaatacacctaaccaatacg
acggaggatacagttgagttttggatggtgccttctgccaatgccaggtactacggatat
gagggtggctatcaggctggctttgtgccgccacaatccacatatgctgtccgttgggtc
ttgtggaacgaagtatctgagccgacaattacggagtcatttcaaatcctgatggtaact
agagccgacatgagccatctctcatcaggagttattcgctatccaggggactttcatgaa
caagtgttcaacgcagccagagacaagggaggcaaggcgcaccgagcctgcttatttgtt
gacaacaatagtgccccggacaagaattatcatagatatgaacatgccttactgacaaaa
tatttcggggaaattacatccatggacgtgcatcctacaacgccactggttttgacgggc
catcagaactttgtttgcatttggagaattaagaagcggcagaatcatgctacggagcac
gctcgcggtttcaaggatgctatggattttgtggttaagttcatcgcaagaatgcaatgg
gttctatcaggggataaaactgggaaagttaacgtgtacacaacagagttgaaattactc
catacattcactgctcacagtgatcgagtgatatcaattgcggttcacccaagtcatcct
tatgtgttgacttcatctgatgacctcctgatcaagctatggaactgggataatgcctgg
acgtgcactcgagaattccaagggcacttgaatcctgctacgcaagtggtctttaacccg
aatgacaatgccgacagttttgctagttgttctcgtgcgtcgtacgactgtggccgccct
ggaaacgttaagatctggaggattgattccaccaatcctgaaactgacttgtatggcgga
ttcagagctattgattggagtgcaccagtcaaagatggccagtatttggttgccgttgtg
gaccagggatatacagagatttgggatatggagaaacagagacgggttcacgatattata
tgtaatggcttccacacacaagtggcttgtcacccgacgcttccaatcatagttacgggc
gaggaaaagggggttactcgtatcattaacctcaatacgttcagggtggagtacattatt
ccagcagttaatgacccattgattgctttgggattcagcgacatagcaggctacaaaagc
ctgatgatcggacgtaagaatatggtgtcacacgtggtaattgatttggaaacagtagca
agtccacataggccacgcttctggcacgataacaatgccaaacaagaaactgaaaggatg
cactcaagtcatgcttgtatggagggggcgaaggattga
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