Setaria italica (foxtail millet): 111257948
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Entry
111257948 CDS
T02818
Name
(RefSeq) homeobox-leucine zipper protein ROC6-like
KO
K09338
homeobox-leucine zipper protein
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sita03000
]
111257948
Transcription factors [BR:
sita03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
111257948
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
GNAT_acetyltr_2
CCDC85
Herpes_IE68
CEP89
DivIC
Motif
Other DBs
NCBI-GeneID:
111257948
NCBI-ProteinID:
XP_022684238
LinkDB
All DBs
Position
VII:complement(16153965..16159677)
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AA seq
789 aa
AA seq
DB search
MAEILVHVTMENDGHLNNNKEQALGLTLGDATAWDYPVEYDMDALLGEDHNVDTNQRTHD
EDHLPESETPQSKRPKRFNVRQVQELEAMFHACTHPDAEQRQQLGTRIGLEERQVRFWFQ
NRRSLMKLKACGNEVKELQQENGKLQADNNELKQLMLDPTCFKCRDPAGATQTTLERQRL
LRENARLKDELQRANAYLKRSIREAGRRPQPMSSENQASAYMNPVPFTCNRTNQATLRSH
AERAFKELVMLATKGQPLWMPTIDGEVLNDQHYDLQTFPGLLGFCPWGFVAEATRETDMI
KGEAMDLVSILTDVAQWSEMFPDIVSYVRSSNVICSGSSSLRDGLIQLVNSYSISCIYCV
HFDHDQSPNSNAVEYLQMDVEFWVQTPCLPTRNVKFLRFSKMMAERKWAVVDVSVDGNQH
GYQQQSSGASCTGYRLLPSGCILEGMRSGFCKVTWVVHGEYLEAAVPTLFRKFLHSGQAF
GACRWLRSFQRQCEYMAVLASSHVPSSSSSSSGAAISSLGKRGVLELAQRMTASFYAAIS
GPVTIASTNITNQWCVSSGTAAERVDAAVRMVIWNCAEIMPGEPAITVLSATTTVRLPGT
PPVRVFEYLCNLQRRGEWDSFVNGGQVKELGYVSTSARLHGNAVSVLRPTIVAQGSRGMN
NNMLILQQSSTDASGSLVVYSLIEENVMRGIMAGAENNIFLVPSGFAILPDGHGKARYNA
ASSSTSAPIDNNDDDGEGALLTVAFQAMLPSSPSGDHATTRAFDNAGQQLCDAIKKIKDA
VGANNVIVN
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaattcttgtgcatgttactatggagaacgatgggcatctgaacaacaacaag
gaacaagcacttggcctcaccttgggagacgctacagcatgggactaccctgtggaatat
gatatggatgctctcctaggagaggaccataatgtggacactaaccagagaactcatgac
gaggaccacctccctgagagtgagacaccgcaatccaagcgtccgaagcgcttcaatgtg
cggcaggttcaggaactcgaagcgatgttccacgcgtgtacccacccagatgctgaacag
cgtcagcaacttggcacaaggattggtttagaggaaaggcaggtccgattctggttccaa
aaccggcgctccttgatgaagttgaaggcatgtggaaacgaggtcaaggagttgcaacaa
gaaaatgggaagctgcaagctgataacaatgaactgaagcaactaatgctggacccgaca
tgcttcaaatgtcgtgaccccgcaggagcaacccagacgacgttggagaggcagcgcctg
ctccgtgaaaatgcaaggctcaaggatgaactgcagcgtgccaatgcttacctgaaaaga
agcatccgtgaggcaggacgacgtcctcagcctatgtcatccgagaatcaggcatcagct
tacatgaaccctgtgccattcacctgcaatagaaccaaccaggctacacttcgatcgcac
gctgagcgtgctttcaaggagcttgtcatgttggcaacgaagggtcagccgttgtggatg
ccaaccatcgacggcgaggtgctcaacgaccagcactacgatttgcaaacgttccctggg
ttacttggattttgcccatgggggtttgtcgcggaggctacaagggagactgatatgatc
aaaggcgaagccatggacctcgtcagcatcctcaccgatgtggcccagtggtcagagatg
ttccctgatatcgtctcatatgtgaggtccagcaatgtcatctgcagcggcagttcctct
ttacgcgacgggctcattcaactggtgaactcatactctatctcgtgcatctattgtgtt
cactttgatcacgatcaatcacctaattcaaacgccgtggagtacttgcagatggatgta
gagttctgggtgcaaacgccgtgcctgccgacccgcaacgtgaagtttctgaggtttagc
aagatgatggcggagaggaagtgggctgtggtagacgtgtctgttgatggcaaccagcat
ggatatcaacagcaaagcagcggagctagttgcacgggctacaggttgctgccatccggc
tgcatacttgagggcatgaggagtggcttctgcaaggtcacatgggttgtgcacggggag
taccttgaagccgctgtgccaacactcttcagaaagtttctccattctgggcaagccttt
ggtgcatgccgttggctcagatcgttccagaggcagtgtgagtacatggccgttctggct
tccagccatgttccaagcagcagcagtagcagctcaggggcagccatatcatcgctgggg
aagaggggagtcttggagctggcccagcggatgacggcgagcttctacgccgccatctct
gggccggttaccattgcatcgaccaacatcaccaaccagtggtgtgttagcagtggcact
gctgctgagagggtggacgcagcagtgcgcatggtgatatggaattgcgctgagatcatg
cctggagagcctgcaatcacggtgctgagcgccaccaccacagtcaggctgcctggcaca
ccgccagtgcgcgtgttcgagtacctctgcaatttgcagcgccgtggcgagtgggatagc
tttgtcaatgggggccaagtgaaggaattgggctatgtttccacgtctgcacgcctccat
ggcaacgctgtctctgtcctccgccccactatcgttgctcagggaagtcgtggaatgaac
aacaacatgctgatcttgcaacagtcaagcaccgacgcgtcaggttcgctggtggtgtac
agtctcattgaggaaaacgtgatgcgtggcatcatggctggcgccgaaaacaacatcttc
ctcgtgccctctggattcgccatcctcccagacggccatggcaaggcccgatacaacgct
gccagctcctctactagtgctcccatcgacaacaacgacgacgacggtgaaggagcactt
cttactgtggcgttccaagcaatgttgcctagctccccatcaggcgaccatgccactacc
cgggcctttgacaatgcaggacagcagctctgcgatgcgataaagaagatcaaggacgcc
gtcggggccaataacgtcatcgtgaactga
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