Streptococcus intermedius C270: SII_0202
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Entry
SII_0202 CDS
T02831
Name
(GenBank) metallo-beta-lactamase superfamily protein 1
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
siu
Streptococcus intermedius C270
Pathway
siu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
siu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SII_0202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
siu03019
]
SII_0202
Messenger RNA biogenesis [BR:
siu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SII_0202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
DUF4453
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
AGU77407
LinkDB
All DBs
Position
complement(201364..203046)
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AA seq
560 aa
AA seq
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MSYTLKSEEVGVFAIGGLGEIGKNTYGIEYQDEIIIVDAGIKFPEDDLLGIDYVIPDYSY
IVENIDRIKGVLITHGHEDHIGGIPFLLKQANVPIYAGPLALALIRGKLEEHGLLRDAKL
YEINQNTELQFKNLKATFFRTTHSIPEPLGIVIHTPQGKIVCTGDFKFDLTPVGEPADLH
RMAALGEDGVLALLSDSTNAEIPTFTNSEKVVGQSIMKIIEGIHGRIIFASFASNIFRLQ
QAAEAAVKTGRKIAVFGRSMEKAITNGIELGYIKTPKGTFIEPNEIKDYPAGEILIMCTG
SQGEPMAALSRIANGTHRQVQLQPGDTVIFSSSPIPGNTTSVNKLINTISEAGVDVIHGK
INNIHTSGHGGQQEQKLMLRLIKPKYFMPVHGEYRMQKVHAGLAMDTGVPKDNIFIMSNG
DVLALTANSARIAGSFNAQDIYVDGNRIGEIGAAVLRDRRDLSEDGVVLAVATVDFKSKM
ILAGPDILSRGFIYMRESGELIRHSQRILFNAIRIALKNKDASIQSVNGAIVNALRPFLY
ENTEREPIIIPMILTPDEEL
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtcttataccttaaaatccgaagaagtcggtgtatttgccattggtggtctaggagaa
atcggaaagaatacctacggcatcgaataccaagatgagattatcattgtcgatgctggt
attaaatttcctgaagacgaccttttagggattgattacgtcattcctgattattcctat
atcgtagaaaatattgaccgtatcaaaggagtgctcatcactcacggtcacgaagaccat
attggtggaattccctttcttcttaaacaagcaaacgttcctatttatgctggtccactt
gcacttgcacttatccgtggtaaattagaagaacacggtctcttacgcgatgccaagctc
tacgaaatcaatcaaaatactgagcttcaatttaaaaatttaaaggcaaccttcttccgt
accactcactccattccagaacctttgggaattgtcattcacacacctcaagggaaaata
gtatgtacaggcgattttaaattcgacttgacccccgttggagagcccgctgatttgcac
cgaatggctgccctcggtgaagatggtgttctagcattgctgtctgactcaaccaatgcg
gaaattccgaccttcacaaactctgaaaaagtcgttggacagtctatcatgaagatcatc
gaaggcattcatggacggattatctttgcctcttttgcctcaaatatcttccgcctccaa
caagctgcggaggctgctgttaaaactgggcgaaaaattgccgtttttggacgctcaatg
gaaaaagccattaccaatggaattgagctaggttacatcaaaacacctaaaggaaccttc
atcgaaccaaacgaaatcaaagattaccctgctggtgagattctcatcatgtgtacaggt
agtcagggagagccaatggcggccctttcacgcattgcaaacggaacacatcgtcaagta
cagcttcaaccaggtgatacagtgattttctcttctagtcctatcccaggaaatactact
agtgtcaataagcttatcaacaccatttcagaagcaggcgttgacgttatccatggaaaa
atcaataacatccatacatctgggcacggaggtcaacaagagcaaaaactcatgcttcgt
ttgataaaaccgaagtatttcatgcccgtccatggtgaataccgtatgcaaaaagtgcat
gcgggacttgcaatggatactggagtgcctaaagacaatatctttatcatgagcaatgga
gatgttctagcgttaactgctaattctgctcgcattgctggaagtttcaatgcacaagat
atttatgtcgatggcaatcgtattggagaaattggtgctgcagtccttcgtgacagacgt
gacctttccgaagatggcgttgtccttgcagtagccactgttgactttaaatccaagatg
atcttagccggtcctgatattctcagccgtggtttcatctatatgcgggaatcaggtgaa
ctgatccgtcatagccaacgtattcttttcaatgcgatacgtattgcattgaaaaataaa
gatgccagcatccagtctgtcaatggagctattgtaaatgctcttcggccatttttatat
gaaaatacagagcgtgagcctatcattattccaatgattttaacaccagatgaagaactc
tag
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