Streptococcus intermedius C270: SII_0771
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Entry
SII_0771 CDS
T02831
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
siu
Streptococcus intermedius C270
Brite
KEGG Orthology (KO) [BR:
siu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
siu03032
]
SII_0771 (topA)
03400 DNA repair and recombination proteins [BR:
siu03400
]
SII_0771 (topA)
Enzymes [BR:
siu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SII_0771 (topA)
DNA replication proteins [BR:
siu03032
]
Prokaryotic type
DNA Topoisomerases
SII_0771 (topA)
DNA repair and recombination proteins [BR:
siu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SII_0771 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DUF2996
Toprim_4
RH_dom
HypA
Motif
Other DBs
NCBI-ProteinID:
AGU77953
LinkDB
All DBs
Position
779655..781739
Genome browser
AA seq
694 aa
AA seq
DB search
MATKTKKKITAKKNLVIVESPAKAKTIEKYLGRNYKVLASVGHIRDLKKSTMSVDFENNY
EPEYINIRGKGPLINDLKKEAKKAKQVYLASDPDREGEAISWHLAHILNLDEHDKNRVVF
NEITKDAVKNAFKEPRQIDMDLVDAQQARRVLDRIVGYSISPILWKKVKKGLSAGRVQSV
ALKLIIDRENEINAFKPEEYWTIDGTFKKGARQFQASFYSINGKKMKLATNDDVKNVLSQ
IKSNEFTVESVEKKERKRHAPLPYTTSSMQQDAANKINFRTRKTMMVAQQLYEGINIGSG
VQGLITYMRTDSTRISPVAQNEAAAFITERFGEKYSKHGSRIKNSSGAQDAHEAIRPSSV
FNTPENIAKYLDKDQLKLYTLIWNRFVASQMTAAVFDTMSVKLEQNSVQFAASGSQVKFD
GYLVIYNDSDKNKMLPEMEKGDIVKRVNTNPEQHFTQPPARYSEATLIKTLEENGVGRPS
TYAPTIETIQKRYYVKLVSKRFEPTELGEIVNSLIVEFFPGIVNVKFTAEMEAKLDDVEV
GKEQWQKVIDEFYQPFEKEVAKAETEMEKIQIKDEPAGFDCEVCGSPMVIKLGRFGKFYA
CSNFPDCRHTQAIVKEIGVTCPQCQKGQVIERKTKRNRIFYGCDRYPDCDFTSWDKPVGR
SCPKCGQYLVEKKVRGGGKQVVCSNGDYEEEKVK
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
ttggcaacaaaaacaaagaaaaaaataacagctaaaaaaaatctggtgattgtagagtcg
ccagctaaggcaaaaacaattgaaaaatatttaggacggaactacaaggttttagctagc
gtaggtcatattcgagatttgaaaaaatctacgatgtccgttgattttgaaaataattat
gagccagaatatatcaatattcgtggaaagggtcctcttatcaatgatttgaaaaaagaa
gctaaaaaggctaaacaagtctatcttgcgagcgacccagatcgagaaggagaagctatt
tcttggcatttggctcatattctaaatttggatgaacatgataaaaatcgcgttgttttc
aacgaaattacgaaagatgcagttaaaaatgcttttaaagaaccacgtcaaattgatatg
gatttggtagatgctcaacaagctcgtcgtgtacttgaccgtattgtagggtattctatt
tctccgattctctggaaaaaagtcaagaaggggttatcggctggacgtgtacaatctgtt
gctttgaagctcatcattgatcgtgaaaacgaaattaatgcttttaagccagaagaatat
tggacgattgatggaacgttcaagaaaggtgctcggcaatttcaagcaagcttttatagt
ataaatggcaagaaaatgaaacttgctaccaacgatgatgtcaaaaatgtgctttctcaa
atcaagagtaatgaatttaccgtagaaagtgttgagaaaaaggaacgcaagcgtcatgct
ccactaccttatactacatcatctatgcagcaagacgctgctaataaaatcaatttccga
actcggaaaactatgatggtcgctcaacagctctacgaaggaatcaatattggttcgggt
gtgcaaggtttgattacttatatgcgtacagattctactcgtattagcccagtggctcaa
aatgaagctgcggcttttattacagagcgttttggcgaaaaatattctaaacatggtagt
agaattaaaaattcttctggtgcacaagatgctcatgaagcgattcgtccatcgagtgtg
ttcaatactcccgaaaatattgctaaatatctagataaagatcaattaaaattgtataca
ttgatttggaatcggtttgtggctagtcaaatgacagcagcggtatttgacactatgagt
gtgaaattagagcaaaatagtgttcagtttgctgcaagtggtagtcaagttaaatttgac
ggttatctagttatttacaacgattctgataagaataaaatgttacctgagatggaaaaa
ggtgacatagtgaagcgagttaacaccaatcctgaacagcattttactcaaccaccagca
cgttattcagaagcaactttaattaagactttggaggagaatggcgttggtcgtccgtct
acctatgcaccaaccattgaaactattcagaaacgctattacgttaaactggtttccaag
cgttttgagccgacggaactaggtgaaattgtcaattcattgattgtagaattcttccca
ggcatcgtaaatgtgaaatttacagccgaaatggaagcaaaactggatgatgtagaagtt
ggaaaagagcagtggcagaaagttattgacgagttttaccagccttttgaaaaggaagtt
gctaaagccgagactgaaatggagaaaatccaaatcaaggatgagccagctggttttgac
tgtgaggtctgtggcagtccaatggtcattaagttaggtcgatttggcaagttctacgcc
tgcagcaatttcccagactgtcgccacactcaggctattgtcaaggaaatcggtgttacc
tgcccgcagtgtcagaaaggtcaagttattgagcgtaagactaagcgaaatcgcattttc
tacggctgtgatcgttatccagattgtgatttcacgtcctgggataaaccggttggccgc
tcttgtccgaaatgtggtcaataccttgtcgaaaagaaagttcgtggtggaggcaagcaa
gttgtctgcagcaatggggattacgaagaagaaaaagtaaaatag
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