Streptococcus intermedius C270: SII_1179
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Entry
SII_1179 CDS
T02831
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
siu
Streptococcus intermedius C270
Pathway
siu03030
DNA replication
siu03430
Mismatch repair
siu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
siu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SII_1179 (holA)
03430 Mismatch repair
SII_1179 (holA)
03440 Homologous recombination
SII_1179 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
siu03032
]
SII_1179 (holA)
03400 DNA repair and recombination proteins [BR:
siu03400
]
SII_1179 (holA)
Enzymes [BR:
siu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SII_1179 (holA)
DNA replication proteins [BR:
siu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SII_1179 (holA)
DNA repair and recombination proteins [BR:
siu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SII_1179 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
AGU78354
LinkDB
All DBs
Position
complement(1232457..1233494)
Genome browser
AA seq
345 aa
AA seq
DB search
MLAIEECKAVNLTNLPSLTILTGDDTGQFEWMKSQFLHQIEYDVADLNVAYFDMKEAAYP
DVEIDLVSLPFFSEEKIVILDHLLDITTAKKRYLTDEELKSFEQYLENPADTTKLVIFAE
GKLDSKRRIVKLLKRDGKIFEASEPKEQELRTYFSKQVQEQGLELRSQVLEELLIKSGFD
FSEISKNLAFLRDYKKDGIITSKDIAEAIPKTLQDNIFDLTQMILHQKVDAARSLVRDLT
LQGEDKIKLIAIMLGQFRIFAQVKILFENGHNESQIVADLSSYLGRKVNPFQIKYALRDV
RSLPLEILQKSLSCLIETDYQIKSGVYEKDYLFDLALLKIMTHNL
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
gtgttagcgattgaagagtgcaaagctgtaaatctgacgaatctacctagtttgacgatt
ttgactggtgatgatacaggacaatttgaatggatgaaatcgcaatttttgcatcaaatt
gaatatgatgttgcagatttaaatgtagcttatttcgatatgaaagaagctgcttatcca
gatgtggagatcgatttagtgagtttgcccttcttttccgaagagaaaatcgttattttg
gatcatcttctggacataacaacggctaaaaagcgctatttgacagatgaggaactaaaa
tcttttgagcaatatttggaaaatcctgcagatacgacaaaattagtcatttttgcagaa
gggaagttagacagtaaacggcgaattgtaaaattgctcaagcgagatggtaaaattttt
gaagcaagtgagcccaaagaacaagaattacgaacctactttagtaagcaagttcaagaa
caggggttagaacttcgttcgcaagttttagaggaattgcttattaagtctggtttcgat
tttagtgaaattagtaaaaacttagcttttttaagggattataaaaaagatggcatcatt
acaagcaaagacattgctgaagcaattccaaaaactttacaggataatatttttgatctt
acccagatgattttgcatcaaaaggtggacgcagcgagaagtttggtacgagatttgact
ttgcaaggtgaagataaaatcaagctgattgcgattatgttgggccagtttcgtatattt
gcacaagtgaaaatcctctttgaaaatggacataatgaaagccagattgtagcagatttg
tctagttatttgggacgaaaggtgaatccttttcaaattaaatatgccttgcgtgatgtc
cgctcattacccttggaaattttacaaaagtctctctcctgcttgattgaaacagattat
cagattaaatcaggagtttacgaaaaagattacttatttgacttggctttgttaaagatc
atgacccacaacttataa
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