Streptococcus intermedius C270: SII_1325
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Entry
SII_1325 CDS
T02831
Name
(GenBank) hypothetical protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
siu
Streptococcus intermedius C270
Pathway
siu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
siu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SII_1325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
siu03019
]
SII_1325
Messenger RNA biogenesis [BR:
siu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SII_1325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
MetOD1
KhpA-B_KH
KH_2
Motif
Other DBs
NCBI-ProteinID:
AGU78499
LinkDB
All DBs
Position
complement(1386356..1387963)
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AA seq
535 aa
AA seq
DB search
MEMIFAGVFAVVIGLVIGYVSISARMKSVKEAAELTLLNAEQEATNLRGQAEREADLLLK
EVKRESKSLKKEALLEAKEEARKYREEVEAEFKSDRQELKQLESRLTERATSLDRKDDNL
TNKEKTLEQKEQSISDRTKNLEARENKLTELEQHKEAELERVAALSQTEARDILLTQTED
KLSKEIATRIREAEQEVKERSDKIAKDILVQAMQRIAGDYVAEQTNSTVHLPDDTMKGRI
IGREGRNIRTFESLTGIDVIIDDTPEVVTLSGFDPIRREIARMTMEALLKDGRIHPARIE
ELVEKNRLEIDHKIREYGEAAAYEIGAPNLHPDLMKIMGRLQFRTSYGQNVLRHSVEVAK
LSGVIASELGENAALARRAGFLHDIGKAIDREVEGSHVEIGTELARKYKEHPIVVNTIAS
HHGDVEAESVIAVIVAAADALSAARPGARSESLESYIKRLQDLEEIANSFEGVKNSFALQ
AGREIRIMVNPGQIKDDKITILAHDVREKIENNLEYPGNIKVTVIREMRAVDYAK
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgatttttgcaggtgtttttgccgtcgtcattggtttagtcattggatatgta
agtatctcagctcgcatgaaatcagtgaaagaagctgcggaacttactcttttaaatgct
gaacaagaagcaactaatttacgtggacaagctgagcgtgaagcggatttgttactaaaa
gaagtgaaacgcgaaagtaaatcccttaaaaaagaagcactgttagaggcaaaagaagaa
gccagaaaatatcgagaagaagttgaggcagaatttaaatctgatcgtcaagaattgaag
caactggaaagtcgtttgacagaacgtgcgacaagtcttgatcgtaaagatgataatttg
accaacaaagaaaaaacgctcgaacagaaagagcaaagtatttctgatagaactaaaaac
cttgaggcgcgtgaaaacaaactgacagagttggagcaacacaaagaagcagaattagaa
cgtgttgccgcactctcacaaacagaagcccgagatatccttctcactcagactgaagat
aaactatcgaaggaaattgcgacacggattcgtgaagcagagcaagaggtcaaagaacgt
tctgataaaatagcgaaggatattttagtccaagctatgcaacgaattgcaggtgactac
gttgctgagcaaactaattcaactgttcatctgccagatgatacgatgaaggggcggatt
attggacgggaaggtcggaatattcggacctttgaaagtttgacaggtattgatgtcatt
attgatgatacaccagaagtggtgaccctatctggattcgatccaattcgtcgtgagatt
gctcgtatgacaatggaagcactattgaaagatggtcgcatccatccagctcgtattgaa
gaattggtagaaaagaatcgtctggaaattgatcataagattcgtgagtatggtgaagca
gcggcttatgaaatcggtgcaccaaatttgcatcccgatttaatgaagattatgggacgt
ttacagttccgtacatcctatggtcaaaatgtactgcgccattctgttgaagtcgcgaaa
ttatctggtgtcattgcaagtgaacttggtgaaaatgctgccttagcacgccgtgctggt
tttcttcatgatattggcaaagccattgaccgtgaagtggaaggtagccacgtggaaatt
ggaacagaattggctcgtaagtataaagaacatccaattgtggttaacacgattgctagt
caccatggtgatgtggaagcagaaagtgttattgctgttatcgtagctgcagcagatgct
ctcagcgccgctcgaccaggcgcacgcagtgaatctctggaaagctatatcaaacgtctc
caagatttggaagaaatcgccaatagctttgaaggcgtgaaaaacagttttgctttacaa
gcaggccgtgagattcggattatggtgaatccaggccaaatcaaagacgacaagattact
atcttagcacatgatgtgcgtgaaaagattgaaaacaatctcgaatatccaggaaatatc
aaagtaacggttattcgggaaatgcgtgctgtagattatgcaaaatag
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