Streptococcus intermedius C270: SII_1571
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Entry
SII_1571 CDS
T02831
Symbol
pnpA
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
siu
Streptococcus intermedius C270
Pathway
siu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
siu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SII_1571 (pnpA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
siu03019
]
SII_1571 (pnpA)
03016 Transfer RNA biogenesis [BR:
siu03016
]
SII_1571 (pnpA)
Enzymes [BR:
siu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SII_1571 (pnpA)
Messenger RNA biogenesis [BR:
siu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SII_1571 (pnpA)
Transfer RNA biogenesis [BR:
siu03016
]
Prokaryotic type
tRNA degradation factors
SII_1571 (pnpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH_2
PCB_OB
KH-I_KHDC4-BBP
S1_2
OB_RRP5_4th
SPATA25
Motif
Other DBs
NCBI-ProteinID:
AGU78733
LinkDB
All DBs
Position
complement(1645705..1647885)
Genome browser
AA seq
726 aa
AA seq
DB search
MVKQIFKTTFAGKELVVETGQVAKQANGSVVVRYGESTVLTAAVMSKKMATGDFFPLQVN
YEEKMYAAGKYPGGFNKREGRPSTDATLTARLIDRPIRPMFAEGFRNEVQVINTVLSYDA
DASAPMAAMFGSSLALSISDIPFNGPIAGVQVGYINGELVINPSQEQKEASLLELTVAGT
KEAINMVESGAKELSEEIMLEALLKGHEAVKELIAFQEEIAAVVGKEKAEVELLHVDEEL
QTEIIAGYNADLQKAVQVEEKLAREAATQTVKDKVIALYEEKYADHEEFDRIMRDVAEIL
EQMEHAEVRRLITEDKVRPDGRKVDEIRPLDAEIDYLPRVHGSGLFTRGQTQALSVLTLA
PMGETQIVDGLDPEYKKRFMHHYNFPQYSVGETGRYGAPGRREIGHGALGERALAQVLPS
LEDFPYAIRLVAEVLESNGSSSQASICAGTLALMAGGVPIKAPVAGIAMGLISDGSNYTI
LTDIQGLEDHFGDMDFKVAGTREGITALQMDIKIEGITAEILQEALAQAKKARFEILDLI
ERTIPAPRPELAPTAPKIDTIKIDVDKIKIVIGKGGETIDKIIAETGVKIDIDEEGNVSI
YSSDQDAINRAKEIITALVREAKVDEVYHAKVVRIEKFGAFVNLFDKTDALVHISEMAWT
RTNKVEDLVQVGDEVDVKIIKIDEKGRVDASMKALLPRPPKEDKEKKHHHKTHKEHKVVR
EEKAQD
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaacaaatatttaaaaccacttttgctggcaaagaattagtggttgaaactgga
caagtggcgaagcaagcgaacggtagcgtagtggtgcgctatggcgaaagtaccgttttg
acagcagccgttatgtcaaagaaaatggcgactggcgatttcttcccgcttcaagtcaat
tatgaagaaaagatgtacgcggctgggaaataccctggtggctttaacaaacgtgaaggg
cgcccttcgacggacgcgactttgaccgctcgcttaatcgaccgtcccattcgtcctatg
tttgcggaaggtttccgcaatgaagttcaggttatcaatactgttctttcttatgatgcg
gatgcttcagcccctatggcagctatgtttggttcatctcttgcgttatcaatctcagat
attccttttaacggaccaattgctggtgtgcaagttggctatattaatggagaattggtt
atcaatccaagtcaagaacaaaaggaagcttcgttattggagttaactgttgcaggaact
aaagaagcgattaacatggtggagtctggtgccaaagaattgtcagaagaaatcatgctg
gaagctctcctgaaaggtcacgaggcagtgaaggaattgattgctttccaagaagaaatc
gcggcagtagttggaaaagaaaaagcagaagttgagcttcttcatgtggatgaagaattg
caaacggaaattatagcaggctataacgctgatcttcaaaaagccgttcaggtagaagaa
aaattagctcgtgaagccgcaacgcaaacagtcaaagacaaagtaatagccctttacgaa
gaaaaatatgctgaccacgaagaatttgaccgcatcatgcgtgatgtggctgaaatttta
gagcaaatggagcatgcagaagtacgacgcttaattactgaagacaaggttcgtccagat
ggtcgaaaagtagatgaaattcgtccactagatgctgaaattgactacctgccacgcgtg
catggctctggtctctttactcgtgggcaaacgcaggctttatctgtcttgacattggca
ccgatgggcgaaacacaaatcgttgatggcttggatccagaatacaagaaacgctttatg
caccactataatttcccacaatattccgtaggagaaacgggacgttatggtgcacctgga
cgccgtgaaatcggtcatggagctcttggtgaacgtgcactagcgcaagtgcttcctagc
ctagaagatttcccttatgcgatccgtttggtagcagaagttcttgagtcaaatggttca
tcttcacaagcctcgatttgtgctgggacacttgctcttatggccggtggggtaccaatt
aaagcacctgtagctgggatcgccatggggctcatttcagatggtagcaactacacgatt
ttaacggatattcaaggcttagaagaccatttcggagatatggatttcaaggtggccggt
acacgtgaaggaattactgctcttcaaatggatatcaagattgaaggaattactgctgaa
atcttacaagaagcattggctcaagctaagaaagcacgttttgaaattttagatttgatt
gaacgtacgattccagctcctcgtccagaactcgctccaactgctccgaagattgatact
attaagattgatgttgataaaatcaagattgtcatcggtaagggcggtgaaacgattgac
aagattatcgcagaaactggcgtaaagattgatatagacgaggaaggaaatgtgtctatt
tactctagcgatcaagatgcgattaatcgtgctaaggaaatcattacagctcttgtgcgt
gaagcgaaagtagatgaagtgtatcatgcaaaagttgttcgaattgagaaattcggtgct
tttgtcaatctatttgacaagacagatgccttagtacacatttctgaaatggcttggacg
cgtactaataaggttgaagatttagtgcaagttggtgatgaagtagatgtcaaaatcatc
aagattgatgaaaaaggtcgtgtggatgcctctatgaaagcattgcttccgcgccctcct
aaagaggacaaggagaaaaaacatcatcataaaacacataaagagcataaagttgttcga
gaagaaaaggcacaagactag
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