Streptococcus intermedius C270: SII_1678
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Entry
SII_1678 CDS
T02831
Symbol
radA
Name
(GenBank) DNA repair protein
KO
K04485
DNA repair protein RadA/Sms
Organism
siu
Streptococcus intermedius C270
Brite
KEGG Orthology (KO) [BR:
siu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
siu03400
]
SII_1678 (radA)
DNA repair and recombination proteins [BR:
siu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SII_1678 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
AAA_16
AAA_22
GvpD_P-loop
AAA
AAA_14
nSTAND3
ABC_tran
Rad51
NTPase_1
AAA_24
SLFN-g3_helicase
NACHT
AAA_5
HypA
DUF7125
ATPase_2
MCM
divDNAB
KdpD
ATP-synt_ab
KTI12
NPHP3_N
zf-RING_10
DUF7129
AAA_18
ABC_ATPase
Motif
Other DBs
NCBI-ProteinID:
AGU78838
LinkDB
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Position
complement(1773618..1775033)
Genome browser
AA seq
471 aa
AA seq
DB search
MADCWNSNERRITIAKKKTTFVCQECGYNSPKYLGRCPNCSSWSSFVEEVEVAEVKNARV
SLIGEKTRPVKLNQVTSSQATRVKTNMEEFNRVLGGGVVPGSLVLIGGDPGIGKSTLLLQ
VSTQLANKGTVFYVSGEESAEQIKLRSERLGDIDNEFYLYAETNMQSIRAEIEKIQPDFL
IIDSIQTVMSPEISSVQGSVSQVREVTAELMQLAKTNNIATFIVGHVTKEGTLAGPRMLE
HMVDTVLYFEGERQHTFRILRAVKNRFGSTNEIGIFEMRSGGLVEVLNPSQVFLEERLDG
ATGSAIVVTMEGTRPILAEVQALVTPTVFGNAKRTTTGLDFNRVSLIMAVLEKRCGLLLQ
NQDAYLKSAGGVRLDEPAIDLAVAVAIASSYKEKPTNPQECYIGEIGLTGEIRRVNRIEQ
RLNEASKLGFTKIFVPKNSLSGLTIPQGIQVVGVTTVGEVLKKVFDEANKN
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggcagattgctggaatagtaacgaaaggagaattaccatagctaagaaaaaaacaact
tttgtctgtcaagagtgcggctataattcgcccaagtatctgggacgttgtcctaattgc
tcgtcttggtcttcttttgttgaagaggttgaagttgctgaggttaaaaatgctcgcgtt
tcactgataggtgagaagacacggccagtcaagttaaatcaggtcacctccagccaagcc
actagagtcaagaccaatatggaagaattcaaccgtgttttgggtggtggtgttgtacca
ggcagtctggttcttatcggcggtgatcccggcatcgggaaatcgaccctacttttgcaa
gtttcaacacaattagccaataaaggaactgttttttatgtttctggtgaagaatcagcg
gagcagatcaagttgcgtagcgagcgtctcggtgatattgacaatgagttttatctctat
gctgaaactaatatgcaaagtattcgtgctgagattgaaaaaatccagcctgatttttta
attattgattctattcaaacagtgatgagtcctgaaatttccagtgttcaaggttctgtt
tctcaggtgcgtgaagtgacagcagaattaatgcaattagctaaaaccaataacattgcg
acttttattgttggacatgtgactaaagaaggaaccttagctggaccgcgaatgttagaa
cacatggtggacactgtgctctactttgaaggcgagcggcagcatacttttcgtatctta
cgagccgttaaaaatcgctttggttctactaatgagattggtatttttgaaatgaggtcg
ggtggtttggttgaggttttgaatcccagccaagtttttttagaagagcgtctagatgga
gcaacaggctcagctattgttgttaccatggaagggacacgacctattttagcggaagta
caagccctagtaacaccaactgtttttggtaatgctaaacggacaacaacaggactggac
tttaatcgtgttagtttgattatggcggttttggagaagcgctgcggacttttattgcaa
aatcaagatgcctatctcaaatcagctggtggtgtgcgcttagatgagcctgctattgat
ttagcggttgcggtagccattgcttccagttataaggaaaagccaaccaaccctcaagaa
tgttatattggtgaaattggtttgacaggtgaaattcgtcgtgttaatcgtatcgaacaa
cgtctcaatgaagctagtaagctaggttttaccaagatttttgtgcccaaaaattccctg
tcaggtttaacgattccacaaggtattcaggtagttggtgtgacaactgttggtgaggtt
ttgaaaaaggtgtttgacgaagcaaataaaaactga
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