Solibacillus silvestris StLB046: SSIL_0205
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Entry
SSIL_0205 CDS
T02162
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit/160 kD subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
siv
Solibacillus silvestris StLB046
Pathway
siv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
siv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SSIL_0205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
siv03021
]
SSIL_0205
03400 DNA repair and recombination proteins [BR:
siv03400
]
SSIL_0205
Enzymes [BR:
siv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SSIL_0205
Transcription machinery [BR:
siv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SSIL_0205
DNA repair and recombination proteins [BR:
siv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SSIL_0205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
BAK14628
UniProt:
F2F3C5
LinkDB
All DBs
Position
242280..245960
Genome browser
AA seq
1226 aa
AA seq
DB search
MIDVNEFEYMKIGLASPDKIRSWSYGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRSKVRRERQGHIELAAPVSHIWYFKGIPSRMGLILDM
SPRALEEVIYFASYVVIEPGQTSLGYKDLLSEKEYRAYREKYGSEFEAAMGAEAIKRLLE
KIDLEDETQVLKEELKSAQGQRRTRAIKRLEVVESFRNSGNKPEWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MAIELFKPFVMKELVERGLAHNIKSAKRKIERLHNEVWDVLEDVIREHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARLLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLEREGARGEGAVFNDSNEVLIAYQNGHVHLHSRIAIK
ASSLNNPTFTEEQNKMFLLSTVGKVIFNEILPRSFPYINEPTSVNLEQKTPEKYFVNLTI
DEELLKEIEATEGYADLSESEKIEAQRRAMLAKHFTNMPVVDPFRKKFLGNVIAEVFKEF
HITETSKMLDRMKNLGFKYSTRAGITVGVSDIVVLPDKGVILEEAQSKVDKVMIQFRRGL
ITEEERYNRVINVWTAAKDEIQGKLMKSLQKTNPIFMMSDSGARGNASNFTQLAGMRGLM
ANPAGRIIELPIKSSFREGLTVLEYFISTHGARKGLADTALKTADSGYLTRRLVDVAQDV
IVREDDCGTDRGLLIGSLMEGNELIEALDERIVGRYVKKTVRHPETGAVILERDGLITQD
IARVIDDANIKEITIRSAFTCNTKHGVCKKCYGMNLATGEGVEVGEAVGIIAAQSIGEPG
TQLTMRTFHTGGVAGNDITQGLPRIQEIFEARNPKGQAVISEITGTVVEIEEIREGLKEV
TIQGDVETRKYQAPYNARLKVAEGDTIIAGQTLSEGSIDPKQLLKVKDVSTVQEYLLKEV
QKVYRMQGVEIGDKHIEVMVRQMLRKVRVIEAGDTELLPGSLLDIHQFSEANAEAVLSGK
TPATCRPVILGITKASLETESFLSAASFQETTRVLTDAAIKGKRDELLGLKENVIIGKLV
PAGTGMQRYRQIRMEQEESAEVITAE
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
ttgatcgatgttaatgaatttgaatatatgaaaattggtttagcttcgcctgacaagatc
cgttcttggtcatacggagaagtaaaaaaaccagaaacaattaactaccgtacattaaaa
ccagaaaaagatggtctattctgtgaacgtatttttggaccaactaaagactgggaatgt
cactgtggtaaatataagcgcgtacgttataaaggtgtcgtttgtgaccgctgtggcgta
gaagtaacgcgttcgaaagttcgccgtgaacgccaaggacatatcgaactagcagcacct
gtatcacatatttggtacttcaaaggtattccaagccgtatgggtcttattttagatatg
tctccacgtgcattggaagaagtaatttactttgcttcatatgtagtaatcgagccaggt
caaacgtctttaggctataaagacttactttctgaaaaagaataccgtgcataccgtgaa
aagtatggcagtgaattcgaagcagcaatgggtgctgaagcgattaaacgtcttttagaa
aaaattgacttagaagatgaaacacaagttttaaaagaagagttaaaatctgcacaaggc
caacgccgtacacgtgcgattaaacgtttagaagtagtagagtcattccgtaactcaggc
aacaaaccagagtggatgattttagatgtactaccggtaattccaccagagcttcgtccg
atggtgcaattagatggtggacgttttgctacatctgacttaaatgacctttaccgtcgt
gttattaaccgtaacaaccgtttaaaacgtttacttgaccttggtgcaccaagcattatc
gttcaaaacgagaaacgtatgttacaagaagcggttgatgcattaatcgataatggtcgt
cgtggccgtcctgtaacaggtcctggtaaccgtcctttaaaatcactttcacacatgctg
aaagggaaacaaggtcgtttccgtcaaaacttacttggtaaacgtgtagactactctggt
cgttcggttatcgtagtaggtcctaacttaaaaatgtaccaatgtggtcttccaaaagaa
atggcaatcgaactgttcaaacctttcgtaatgaaagagttagtggaacgtggccttgcc
cataacatcaagagtgcaaaacgtaaaattgagcgtttacacaatgaagtttgggacgta
ttagaagatgtaattcgtgagcatccggtattacttaaccgtgcaccgacattacaccgt
cttggtatccaagcattcgagcctacactagtagaaggccgtgcaatccgtcttcaccca
ttagtatgtacagcttataacgctgacttcgatggtgaccaaatggcggttcacgttcca
ttatcagctgaggcacaagcagaagcccgtttacttatgttagcggcacaaaacatcctt
aacccgaaagacgggaaaccggtagtaactccatctcaggatatggtattaggtaactat
tacttaacacttgagcgtgaaggtgctcgtggtgaaggtgctgtatttaatgattcaaac
gaagtgttaatcgcctaccaaaacggtcatgtacatttacactctcgtattgcgattaaa
gcaagctcattaaataacccgacatttacagaagaacaaaataaaatgttcctattatcg
actgtaggtaaagtaatcttcaatgaaattttaccacgctcattcccttatattaatgag
ccgacttcagtcaacttagagcaaaaaacacctgaaaagtacttcgtgaacttaacaatt
gacgaagaattactgaaagaaatcgaagcaacagaaggctatgctgatttatctgaatca
gaaaaaattgaagcacaacgccgtgctatgttagcgaagcacttcacaaatatgcctgta
gtagatcctttccgtaaaaaattcttagggaatgttattgctgaagtatttaaagagttc
cacattacagaaacttctaagatgcttgaccgcatgaaaaacttaggtttcaaatattct
actcgtgcaggtattacagtaggtgtatctgacatcgtcgtattaccggataaaggcgta
atccttgaggaagcccaaagcaaagtagataaagtaatgatccagttccgccgtggttta
attactgaggaagagcgttataaccgagttattaacgtatggacagctgcgaaagatgaa
attcaaggcaagctgatgaaatctttacaaaaaactaacccgatcttcatgatgtctgac
tctggtgcccgtggtaacgcatcgaactttacacagttagctggtatgcgtggtctgatg
gccaacccggctggtcgtatcatcgagttaccaatcaagtcttcattccgtgaaggttta
acagtattagagtacttcatctctacacacggtgcgcgtaaaggtcttgccgatacagca
ctaaaaactgccgattcaggttacttaactcgtcgtttagttgacgtagcacaagatgtt
atcgttcgtgaagacgactgtggtactgaccgcggtttattaatcggttcattaatggaa
ggaaacgaattgattgaagcgttagacgaacgtattgttggtcgttacgtgaagaaaaca
gttcgccatccagaaacaggagcggttatcttagagcgtgatggtttaattacacaagat
attgctcgcgtaatcgatgatgcaaatatcaaagaaattacaatccgttctgcatttaca
tgtaatacaaaacacggtgtatgtaaaaaatgttacggtatgaacttagctactggtgaa
ggggtagaagttggtgaagcagttggtattattgctgcacaatctatcggtgaaccaggt
acacagttaacgatgcgtacattccatactggtggggtagccggaaacgatattacacaa
ggtcttccacgtatccaggaaattttcgaggcgcgtaaccctaaaggtcaagcagtcatt
tcagaaattactggtacagtagtagaaattgaagaaattcgtgaaggtcttaaagaagta
acaatccaaggtgatgtggaaacacgtaaataccaagcaccttataacgcgcgtctaaaa
gtagcagaaggcgacacaattatagcgggtcaaacattgtctgaaggttctatcgatccg
aagcaattattaaaagttaaagatgtatcgacagttcaagaatatttattaaaagaagta
cagaaagtataccgtatgcaaggggtagaaatcggagacaaacacatcgaagtaatggtt
cgccaaatgcttcgtaaagtgcgtgtgattgaagcaggtgacactgagttattaccaggt
tcacttcttgatattcaccaattctctgaggcgaatgctgaagccgtacttagcggtaaa
acaccagcaacttgccgtcctgtcattttaggtattacaaaagcttctcttgaaacagaa
tcattcttatcagctgcatcattccaagaaacaacacgtgtgttaacggatgctgcaatt
aaaggtaaacgtgatgagcttctaggtctgaaggaaaacgtaattatcggtaaactagtt
ccggctggtactggtatgcaacgttaccgtcaaatccgtatggagcaagaagaatcagca
gaagtaattacagctgaatag
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