KEGG   Solibacillus silvestris StLB046: SSIL_0245
Entry
SSIL_0245         CDS       T02162                                 
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit/40 kD subunit
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
siv  Solibacillus silvestris StLB046
Pathway
siv03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:siv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SSIL_0245
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:siv03021]
    SSIL_0245
   03400 DNA repair and recombination proteins [BR:siv03400]
    SSIL_0245
Enzymes [BR:siv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     SSIL_0245
Transcription machinery [BR:siv03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     SSIL_0245
DNA repair and recombination proteins [BR:siv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      SSIL_0245
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L SpoIVA_ATPase Dockerin_1 HHH_5 DUF961
Other DBs
NCBI-ProteinID: BAK14668
UniProt: F2F4D4
LinkDB
Position
274530..275474
AA seq 314 aa
MIEIEKPKIETVEISEDAKYGKFVVEPLERGYGNTLGNSLRRILLSSLPGAAVTSIQIDG
VLHEFSTVEGVVEDVASIILNVKKLALKIYSDEEKVIEIDVKGDGTVTAADITHDSDVEI
LNPDLYIATIAKNGHLRMRMYAQRGRGYTPADQNKREDLPIGVIPIDSIYTPVSRVNFQV
ENTRVGQNSDYDKLSLDVWTDGSIGPKEAISLGAKILTEHLNIFVGMTNEAQTAEIMVEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVLELANKSEDDMMKVRNLGRKSLEEVK
HKLEELGLGLRKED
NT seq 945 nt   +upstreamnt  +downstreamnt
atgatcgaaattgaaaaaccgaagattgaaacagtggagattagcgaagatgccaaatac
ggcaagtttgttgtagaaccgcttgaacgcggttatggtaatactttggggaattctcta
cgtcgtatccttctgtcttcattacctggagctgctgttacgtcaattcaaattgacggc
gtattacacgaattctcaactgtagaaggcgttgtagaagatgtcgcttcgattatctta
aacgtgaaaaagctagctttaaaaatctactctgacgaagaaaaagttattgagattgat
gtaaaaggtgacggaacggttactgcagctgacattacacatgacagtgatgtagaaatt
ttaaacccagatctatatatcgcaacaatcgctaagaacggtcatttacgtatgcgtatg
tacgcacaacgtggccgtggttatactcctgctgatcaaaacaaacgtgaggatcttcct
atcggcgtgatcccgatcgactctatttacactccagtttcacgcgtcaacttccaagta
gagaacactcgtgttggacaaaattctgactacgacaagttatcacttgatgtatggaca
gatggaagcatcggtcctaaagaggcgatttcacttggagcgaaaattttaactgaacac
ttaaatatcttcgttggcatgacgaacgaggcacagactgctgaaatcatggtcgaaaaa
gaagaagaccaaaaagaaaaagtattagagatgactatcgaagaacttgatctttctgtt
cgttcttacaactgcttgaagcgtgctggtatcaatacggtactagaattagctaacaag
tcagaagacgatatgatgaaagtacgtaatcttggtcgtaagtctcttgaagaagttaag
cataagttagaagagcttggtttaggattgcgtaaagaagactaa

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