Solibacillus silvestris StLB046: SSIL_0245
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Entry
SSIL_0245 CDS
T02162
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit/40 kD subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
siv
Solibacillus silvestris StLB046
Pathway
siv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
siv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SSIL_0245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
siv03021
]
SSIL_0245
03400 DNA repair and recombination proteins [BR:
siv03400
]
SSIL_0245
Enzymes [BR:
siv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SSIL_0245
Transcription machinery [BR:
siv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SSIL_0245
DNA repair and recombination proteins [BR:
siv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SSIL_0245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SpoIVA_ATPase
Dockerin_1
HHH_5
DUF961
Motif
Other DBs
NCBI-ProteinID:
BAK14668
UniProt:
F2F4D4
LinkDB
All DBs
Position
274530..275474
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AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVEISEDAKYGKFVVEPLERGYGNTLGNSLRRILLSSLPGAAVTSIQIDG
VLHEFSTVEGVVEDVASIILNVKKLALKIYSDEEKVIEIDVKGDGTVTAADITHDSDVEI
LNPDLYIATIAKNGHLRMRMYAQRGRGYTPADQNKREDLPIGVIPIDSIYTPVSRVNFQV
ENTRVGQNSDYDKLSLDVWTDGSIGPKEAISLGAKILTEHLNIFVGMTNEAQTAEIMVEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVLELANKSEDDMMKVRNLGRKSLEEVK
HKLEELGLGLRKED
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaattgaaaaaccgaagattgaaacagtggagattagcgaagatgccaaatac
ggcaagtttgttgtagaaccgcttgaacgcggttatggtaatactttggggaattctcta
cgtcgtatccttctgtcttcattacctggagctgctgttacgtcaattcaaattgacggc
gtattacacgaattctcaactgtagaaggcgttgtagaagatgtcgcttcgattatctta
aacgtgaaaaagctagctttaaaaatctactctgacgaagaaaaagttattgagattgat
gtaaaaggtgacggaacggttactgcagctgacattacacatgacagtgatgtagaaatt
ttaaacccagatctatatatcgcaacaatcgctaagaacggtcatttacgtatgcgtatg
tacgcacaacgtggccgtggttatactcctgctgatcaaaacaaacgtgaggatcttcct
atcggcgtgatcccgatcgactctatttacactccagtttcacgcgtcaacttccaagta
gagaacactcgtgttggacaaaattctgactacgacaagttatcacttgatgtatggaca
gatggaagcatcggtcctaaagaggcgatttcacttggagcgaaaattttaactgaacac
ttaaatatcttcgttggcatgacgaacgaggcacagactgctgaaatcatggtcgaaaaa
gaagaagaccaaaaagaaaaagtattagagatgactatcgaagaacttgatctttctgtt
cgttcttacaactgcttgaagcgtgctggtatcaatacggtactagaattagctaacaag
tcagaagacgatatgatgaaagtacgtaatcttggtcgtaagtctcttgaagaagttaag
cataagttagaagagcttggtttaggattgcgtaaagaagactaa
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