Solibacillus silvestris StLB046: SSIL_1199
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Entry
SSIL_1199 CDS
T02162
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
siv
Solibacillus silvestris StLB046
Pathway
siv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
siv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SSIL_1199
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
siv03400
]
SSIL_1199
Enzymes [BR:
siv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SSIL_1199
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SSIL_1199
DNA repair and recombination proteins [BR:
siv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SSIL_1199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
BAK15622
UniProt:
F2F8Z5
LinkDB
All DBs
Position
1315711..1316583
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AA seq
290 aa
AA seq
DB search
MPELPEVEGVVRDLRPIVEGKTIKSVSLSDVVYTSHEAGKQAIVKNAKPSQFELLVRDMK
IDKLERRSKYIFFHLKKDDERFILVNHLGMSGAWFVVTDVLEITEEKFRKHIHAIFTLAS
GELLVYADIRRFGELRFIKEIADHPPLLKMAPEPFDEIACDFFIMQSEKPKFAKKSIKEV
IMDGQVISGCGNIYATEALFKMLIHPGKATNELSREQKTMLFRVICDVLQESIDSGGSTI
SDYRSINGGAGTMQHRLKMYGKKQCVVCETNTESLVIAGRTSTYCPQCQK
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattaccagaagtagaaggggtcgtacgtgatttacggccaattgtagaagga
aagacgattaaatctgtctctttatcggatgtcgtttatacatcgcatgaagctggaaaa
caggcgattgtaaaaaacgcgaagccttctcagtttgaactattagtacgcgatatgaaa
atcgataaattggagcgcagatcaaaatatatattctttcatctcaagaaagatgatgaa
cgttttattttagtgaatcatttagggatgagtggcgcatggtttgttgttactgatgtg
ctggagataacggaagaaaaattccgcaagcatattcatgcaatattcacattggcaagc
ggagaattacttgtctatgcagatatccgccgttttggtgaattacggtttattaaagaa
attgccgatcatccaccattgttaaaaatggcaccggagccttttgatgaaatcgcctgt
gattttttcatcatgcaaagtgaaaaaccgaaatttgcgaaaaaatcgattaaagaagtc
atcatggatggtcaggtgatttctggctgcgggaatatttatgcaaccgaagcattgttc
aaaatgcttattcaccctggaaaagcaacgaatgagttaagccgcgagcagaagacgatg
ctctttcgtgtgatttgtgatgtgttgcaggaaagcatagattcgggtggatcgacaatt
tcagactatcgcagtattaatggtggtgctggcacgatgcagcatcgactgaaaatgtat
ggaaaaaagcaatgtgttgtatgtgaaacaaatacagagtcgctcgtaattgcgggcaga
acatcaacatattgtccgcaatgtcaaaaataa
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