Solibacillus silvestris StLB046: SSIL_1493
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Entry
SSIL_1493 CDS
T02162
Name
(GenBank) single-stranded DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
siv
Solibacillus silvestris StLB046
Pathway
siv03410
Base excision repair
siv03430
Mismatch repair
siv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
siv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SSIL_1493
03430 Mismatch repair
SSIL_1493
03440 Homologous recombination
SSIL_1493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
siv03400
]
SSIL_1493
DNA repair and recombination proteins [BR:
siv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
SSIL_1493
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SSIL_1493
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SSIL_1493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
BAK15916
UniProt:
F2F3G8
LinkDB
All DBs
Position
1584775..1587096
Genome browser
AA seq
773 aa
AA seq
DB search
MIQSQKVWTITKQDEQLVKQFSEQLNISTIAAKILIARGCTLIEEAKPLLKIDETQYHDP
YLMAGMEDAVMRIEQALDNGEKILVYGDYDADGITSTTVLLNALLDLGADVSFVIPDRFI
HGYGPNEELFKKAYEDGVNLIITVDNGISGIEQVKMARELGMDVIITDHHEAGNILPDAN
VIIHPRVPEGHYPFGELAGVGVAFKLAHALYGELPDHLFEYVAVGTIADLVPLVGENRYL
VQRGLQALKQSPNPWVKAICDASGANKKDINEETVGFYFGPRLNAIGRLGSAEPGVHFLM
SEDPLQANTLATQLNDKNTERKKIVEDITNEAMAMIEEDASLKDSLVLVVAGEGWNPGVV
GIVASRLVEKYYRPTIILSLNLEKGIAKGSARSIEGFHLFNELAKNRDILPHFGGHPMAA
GMTLPIEHVASLRTRLNEQAKLCLTEEQLVQNMQIDVPIELSEITVEAIEELRQLAPFGT
EFPKPVFGIQDVKVKSMRKIGSGENHLKMELEDPYRTLDAIGFNKGFLHDEISYGVALSL
VGDLQINEWQGNKKPQFMIQDVSVNEWQLYDYRGKSKTANWLAKIHVEKTDFIAFSQQTK
LHFEQEIPKEIINFTIETETDKLHKNIVLLDLPENVAALEKLLQDVQIERIYAHLYTDQS
AYFNGMPTREHFKWYYGFLKKRPAFNLKEHIRQLSEHIGLNIEVIKFMTKVFFELGFVTI
ENGLTTVNENAPKKALSEATSYKLRSQQIELEQKLVYATYSELKQWFNERLSS
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgatacagtcacaaaaagtatggacaataacaaagcaagatgagcagctagtaaaacaa
ttcagtgaacagctgaatatttcaacgattgcagcaaaaattttaattgcacgtggttgc
acattgatagaagaggcaaaaccattactgaaaattgatgaaacccagtatcatgatcca
tatttaatggctggaatggaagacgcagttatgcgcattgaacaggcattggataatgga
gaaaagattctggtatatggtgattacgacgcggacggtattacaagtacaactgtgctg
ctaaatgctttacttgatctgggggcagatgtcagttttgtcattccggatcggtttatt
catggatatggaccgaatgaagaacttttcaaaaaagcttatgaagatggcgtaaattta
attattacggtcgataatgggataagcgggattgaacaagtaaaaatggcaagagagctt
ggtatggatgtgattattaccgatcaccatgaagcgggtaatattttaccggatgccaac
gtcatcatccatccgcgtgtgccagaaggtcattatccgtttggagaactcgcaggggta
ggggtagcctttaaattggcacatgcattgtacggcgagttgcctgatcatctatttgaa
tatgtggcagtggggacgattgccgatttagtgccgctcgttggcgaaaatcgctattta
gtacagcgcggtctacaggcgttaaagcagtctccaaatccttgggtaaaggccatttgc
gatgcatcaggggcaaacaagaaagacatcaatgaagaaactgttggcttttattttggc
ccccgcctgaatgcaatcggacgactaggcagtgccgaaccgggagtacactttttaatg
agcgaagacccgcttcaggcaaatacactggctacccaattgaatgataaaaatactgaa
cggaaaaaaattgtggaagacattacaaatgaagcaatggctatgattgaagaagatgct
tcattaaaagattcccttgttctagtcgtagcaggggaaggctggaatccaggtgttgtc
ggaatcgttgcatcgcgattagtcgaaaaatattaccgtccgacaatcattctttccctt
aatcttgaaaaagggattgcaaagggttctgcaagaagtattgaaggcttccatctgttc
aatgagttggcaaaaaaccgtgatattttaccacatttcggcggccatccaatggcagct
gggatgacgttaccgattgaacatgtggcatcattacgtacccggttaaacgaacaggcc
aaactttgtttaacagaagagcagcttgtgcaaaacatgcaaattgatgttccgatagag
ctaagtgaaattaccgttgaggcgattgaagaactgcgacaattggctccatttggtaca
gaatttccgaagccggtttttgggattcaggatgtaaaagtaaaatcgatgcgcaaaatc
ggttccggtgaaaatcatctgaaaatggaattggaagatccgtatcgtactcttgatgca
attgggttcaataaaggttttttacatgatgaaatttcatatggtgttgcattatcattg
gttggtgatttgcaaatcaatgaatggcaggggaataaaaaaccgcaattcatgattcag
gatgtttcggttaatgaatggcagctgtacgattaccgtgggaaaagcaagaccgcaaac
tggcttgctaaaattcatgtggaaaaaactgattttattgctttttcccaacagacaaaa
ctgcactttgaacaggaaattccgaaagaaattattaatttcacaattgaaacggaaacc
gataaactgcacaaaaatatcgtattgctcgatttgccggaaaatgtagccgctttggaa
aaattactgcaagacgttcaaattgaacgaatctatgcacatttatatacagaccaatca
gcgtattttaatggtatgccgacaagggaacactttaaatggtattatggattcctgaaa
aaacgtccggcttttaacttgaaagaacatattcgacaattatccgaacatatcggacta
aatatagaagtaattaaatttatgacaaaagtgttttttgagctaggatttgttacaata
gagaatggtttgacgacagtaaacgaaaatgcaccgaaaaaagcattatccgaagcaacg
tcatataaattgcgttcacaacaaatcgaacttgagcaaaagctggtatatgccacatac
agcgaacttaagcaatggtttaatgaacgattgagttcttga
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