Solibacillus silvestris StLB046: SSIL_1737
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Entry
SSIL_1737 CDS
T02162
Name
(GenBank) DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog
KO
K03092
RNA polymerase sigma-54 factor
Organism
siv
Solibacillus silvestris StLB046
Pathway
siv02020
Two-component system
siv02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
siv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SSIL_1737
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SSIL_1737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
siv03021
]
SSIL_1737
Transcription machinery [BR:
siv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SSIL_1737
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_23
HTH_17
Fe_dep_repress
HTH_3
Arg_repressor
HTH_21
Get5_bdg
Fuz_longin_2
Motif
Other DBs
NCBI-ProteinID:
BAK16160
UniProt:
F2F965
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All DBs
Position
1824370..1825707
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AA seq
445 aa
AA seq
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MQMILNNSQKLTQVLSAKLLQHLEILQFSTNELEQYIYEKANENPLLSVIDAKVKGNYEE
IMKLAKCSINTFSSHWNRSGKEQYNIIEKTLAEKVSYEQFLIEQIPMQNNLSEVDLKILN
FLIQSLDDRLFLDTDLEFVCKKYNTSIVHVEAILNLLQTFEPVGVGARSYTEYLLIQIDH
DPYAPKMAAEFINADLKLVATQAIKKLSKKYKMPLQEVQHTVNYIKNLNPMITGDKVEAI
PYIIPDLTVKNVEGEWAIKLNRHYLPSVTIDETYVKLLKNDANNETYYRDSLKDALALME
GIEQRDKTLYDLARLLVQIQEDFFAKGMDTIKPMRLKDVSEVLDVHESTVSRAIRGKYIQ
TPHGIYALQSLFTKGLTNASGKMDSIMYIKKRIKELIEEEDKKKPLSDQQMTNVLSKEGI
QISRRTVAKYREEMKIVSSANRTFG
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatgattttaaacaattcacagaagttgacacaggttttgtcggcgaaattgttg
cagcatttagaaatacttcaattttctacgaatgaattagaacaatatatttatgaaaaa
gcaaatgaaaatccacttctttctgtaattgacgcaaaagtaaaaggaaattacgaggaa
attatgaaactggcaaagtgttcaattaacacgttttcatcacactggaatagatccggt
aaagagcaatataacatcattgaaaaaacacttgcggaaaaagtgagctatgaacaattt
ctaattgaacagattccaatgcagaataatttatccgaagtggacttgaaaattttaaac
tttttaatccagtctttagatgatcgtttatttttagatacagatttagaatttgtatgc
aaaaaatataacacgagtattgtccatgtcgaggcaatattaaatttgctccaaactttt
gaaccggttggtgttggtgctcgcagctatacagagtatttgttgattcaaattgatcat
gacccatatgctccaaaaatggcagccgaatttatcaatgccgatttaaagttggtcgca
acacaggcaattaaaaagttaagtaaaaaatataaaatgcctcttcaggaagtacaacat
actgttaactatattaaaaacttgaacccgatgattacaggagataaggtggaagcaatt
ccatatatcatcccagatttaacagtcaaaaatgttgaaggggaatgggcgattaaatta
aatcgtcactatttgccatctgttacaattgatgaaacttatgtgaaactacttaaaaat
gatgcgaacaatgaaacctattaccgagattcacttaaagatgcacttgcattaatggag
ggcattgagcagcgtgataagacactttatgatttggctcggttgctcgtacaaatacag
gaagatttttttgcaaaaggaatggatacaatcaagccgatgcgtttaaaagatgtatct
gaagtacttgatgtgcacgaatcaacagtcagcagggctatccgggggaaatatattcaa
acaccgcatggaatttatgctttgcagtctttgtttacaaaagggctaaccaatgcttcg
ggcaaaatggattccataatgtatattaagaagcggataaaagagctgattgaagaggaa
gacaagaaaaaaccattatccgatcaacaaatgacaaatgttcttagtaaggaaggaatc
caaatctcaagacgaactgtagcaaaataccgggaagaaatgaaaattgtcagttcagct
aatcgtactttcggatag
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