Solibacillus silvestris StLB046: SSIL_3249
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Entry
SSIL_3249 CDS
T02162
Name
(GenBank) ATP-dependent nuclease, subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
siv
Solibacillus silvestris StLB046
Brite
KEGG Orthology (KO) [BR:
siv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
siv03400
]
SSIL_3249
Enzymes [BR:
siv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SSIL_3249
DNA repair and recombination proteins [BR:
siv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SSIL_3249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
RTP
NTPase_1
AAA_22
AAA_16
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BAK17672
UniProt:
F2F2Y4
LinkDB
All DBs
Position
complement(3319392..3323033)
Genome browser
AA seq
1213 aa
AA seq
DB search
MTLRVITGRAGTGKTTLIHREIVNDLKTNIFGHPIFILVPDQMSFTTEYELTTNYDIEGM
MRAQVMTFKRLAWFVLQNEGGIAHERIDGTGYRMLLRRILEEHQEEFLLFKRAAGKPGFT
KEVEQILKEFSQYHIDVETIEPLIESLRLNGASEVLLHKLYDLNIILKQLHERIGTDYID
GDGYFPLLIERIPKMESLRNTDIYLDGFVSFNGQEFAILKELLIYAKSVTIVLPMEDPQM
DLLEGSVFYRAAMTYDKIKNELQKLRFERGIDIEEEPCVHLEVNYRATNRDLLHIEHCFD
KITDRPVESTGHTKILEGVNPRAEVQGIAQEIKQLVLEKGLRYKDIGIMYRQADVYDAII
GTTFTQYEIPFFSNEKRAMLYHPLIEFSRSVLEIITTNWKYEPIFRSIKTDLFFPYGANL
VAMRDRADILENFVIAKGIVHDRWMKEEVWHYRRFKSLEKVNAVQTEDELEHEQLLKSVR
DLIREPVLALQNRLKGKKTGREIVVALYEFMEQLDIYKKLLKMQEQEEQSASLHQSLEHE
QAWNGWIHILEQFDLMFGDKVMPLEEVAQILDEGFETLEFASVPPTLDEVTVSTVEFARF
DNKKAIFVIGVNDGVYPMRMEAGGLLSDDERETFEKIDVELAPGIKSRLLQESFLFYRAI
SSSTQYLYITYANADEESKSKLPSLYINRLHSMFEMTENSGTPDEKSVRTLPHRKIAMDP
LDEFQKDNVLNYIQHPSPAIGFLMTQLKQAQHERRPLTEEWAALKAFYEREQRWKDVLNV
VEKPLYTTNEAEPLTEEVATALYGEDFLASVSRIERFYSCPYSHFASYGLKLQERTEFKL
ETFAMGDLFHEAIRTILSEKDPSIPLTTYVACYKKADETISKLEDYFSYSILKSSHRFEY
IKTKLVKIVARTIYALINQSELSKFKAIAHEKPFGKRDDKNTEQDDRNPLEALEIDLEHN
RKMYVRGQIDRIDAYKDAENLYLRVIDYKSSGRKLDFTEVYNGISLQLLTYLDVAMKNIP
IIAREGKFIQDLSELENIIVQAAGMFYLHVHNPLIPTEDYEQYERVESLRQEKFKLSGYM
VKDVEVAQLMDKSLEPSKTSIIVPAAFKSGENPEFNNRSSKVIEQDQMENLQEFVHYKFR
QAGNEIYRGNTEIKPYSLGNQKACTYCSFKSVCQFDQSETGNSYNEIKKQPEQEVFENIK
KVVCADDNSSEAE
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
gtgacgttacgagttataacaggacgggcaggcacggggaaaacgactttgatacaccgt
gaaatagtcaatgatttaaaaacaaatatatttggacatccaatttttatattagttcct
gaccaaatgtcgtttacaacggaatatgagctgacgacgaactatgacattgaaggaatg
atgcgtgcacaggttatgacattcaaacggctggcctggtttgtgctgcaaaatgaagga
ggtatcgcccacgaacgtattgacggcacagggtaccgcatgctgttacgacgtattttg
gaagaacatcaggaagagttcctattatttaaacgtgcggcaggtaaacccggttttacg
aaagaagtcgagcagattttaaaggaattcagccaatatcatatcgatgtggaaacaatc
gagccattgatcgagtcattaagattaaacggggcaagtgaagtactgcttcataaatta
tatgacctgaatattattttaaagcagctgcacgaacggatcgggacagattatattgat
ggcgatggttattttccgctgctaattgaacgtattccgaaaatggaaagcttgcgcaat
accgatatttatctggacgggtttgtttcgtttaatggacaggaatttgccattttaaaa
gagctgcttatttatgcgaagagtgtcacaattgtgcttccaatggaagacccgcaaatg
gatctactggaaggctcggtattttacagagctgcgatgacgtatgacaaaataaagaat
gagctgcaaaagttacgattcgaacgaggaattgatattgaagaggagccgtgtgttcat
ttagaagtaaactaccgtgcgacaaatcgggacttgctccatattgaacattgcttcgac
aaaattaccgatagaccagtcgaatcaacgggacacacgaaaatattggaaggcgtaaat
ccgcgcgcagaagtgcaaggtattgcccaggaaattaaacagctcgttctggaaaagggg
ctgcgttataaagatatcgggattatgtaccgtcaggcagatgtatatgatgcgattatc
ggaacgacctttacacagtatgaaattccgtttttctcaaatgagaagcgggcgatgctt
tatcatccgcttatcgaatttagtcgatctgtactggaaattatcacaactaactggaaa
tacgaaccgattttcagaagtataaaaacagatctgttcttcccatatggagccaactta
gtcgcgatgagagacagagcggatattttggaaaacttcgtcattgcaaaagggattgtt
catgaccgttggatgaaagaggaagtatggcattaccgccgctttaaatcactggaaaaa
gtaaacgcggttcagacagaagacgagctggagcatgaacagcttttgaaatcggtacgt
gacttaatccgtgaaccggtactggcattgcagaaccggttgaaagggaaaaagacaggc
cgtgaaattgtcgttgcactgtatgaatttatggagcagcttgatatttataaaaagctg
ctaaaaatgcaggagcaggaagagcagtccgcttcattgcatcagtcattggagcatgag
caggcgtggaatggctggattcatattctggagcagtttgacctgatgttcggcgataaa
gttatgccgttggaagaagttgcgcaaattttggatgaaggttttgaaacacttgaattt
gcaagtgtaccgccaacattggatgaagtgaccgtttcgactgtcgagtttgcacgattt
gataataaaaaggcgattttcgtaatcggtgtcaatgacggggtgtacccgatgcgtatg
gaagcgggaggtctgctgtctgatgatgagcgtgaaacatttgaaaaaatcgatgtggaa
cttgcaccaggtataaaaagcaggctcctccaggaaagcttcctcttttaccgggcaatt
tcttcatcgacacaatatttatatattacgtatgcaaatgcagatgaggaaagtaaaagc
aaactgccatcactttatattaaccgccttcacagcatgtttgaaatgacggaaaacagc
ggcacaccagatgaaaaatcggttcgtacactgccgcatcggaaaattgcgatggacccg
cttgatgagttccaaaaagacaatgtgctcaattatatacagcacccatcaccagcaatt
ggcttcttaatgacccagctgaagcaggcacagcacgaacgacgtccacttaccgaagaa
tgggcagcattaaaagctttttacgaacgggaacagcgctggaaagatgtgctgaatgtc
gtggaaaaacctttatatacgacaaatgaagcggagccgctaacggaagaagtagcgaca
gcattgtatggagaagatttcttggcgagtgtatcacgtatcgaacgcttttacagctgt
ccgtattcgcattttgcgtcctacgggctgaaattgcaggagcgtacagaattcaagctg
gaaacgttcgcgatgggcgatctgttccatgaggcgatccggacgattttatccgagaaa
gatccatcgattccgctcacaacatatgtagcgtgctataaaaaagcggatgaaacgatt
tcaaaactggaggattatttctcttacagtattctgaagagcagccaccgtttcgaatat
attaaaacaaagcttgtgaaaattgttgcccgtacgatttatgcactcattaatcaaagt
gagctgtcgaagtttaaagcgattgctcatgaaaagccatttgggaagcgagacgataaa
aatacggaacaggatgaccgcaatccgctggaagcactggaaattgatttggagcataac
cggaaaatgtatgtacgcgggcaaattgaccggatcgatgcatataaagatgcggaaaac
ctgtatttgcgcgttattgattataaatctagcggccgtaagctcgattttacagaagta
tataacgggatttcactgcagctgttgacgtatttggatgtagcgatgaaaaatatcccg
ataatcgcacgcgaaggaaagttcatccaggacttatcggagctggaaaatatcattgtc
caggcggcagggatgttctatctccatgtgcataatccgcttattccaacagaggactat
gagcagtatgagcgtgtggaaagtttacgtcaggagaagttcaagttaagcggctatatg
gtaaaagatgtggaagtggcacagttgatggacaagtcactcgagccgagtaaaacatcg
attattgtgccggcagcgtttaaaagcggcgagaatccggaatttaacaaccgttcatca
aaagtgattgaacaggaccagatggaaaacctgcaggaatttgtacactataaattccgt
caggcgggcaatgagatttaccgcggaaatacggaaattaaaccgtacagcctagggaat
caaaaggcttgtacgtattgcagctttaaatcggtttgccagttcgaccagtcggaaacc
ggcaacagctataatgaaataaaaaaacagccggaacaggaagtattcgaaaatattaaa
aaggtggtatgtgcagatgacaattccagtgaagccgaatga
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integrated database retrieval system
