Solibacillus silvestris StLB046: SSIL_3259
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Entry
SSIL_3259 CDS
T02162
Name
(GenBank) helicase subunit of the DNA excision repair complex
KO
K03702
excinuclease ABC subunit B
Organism
siv
Solibacillus silvestris StLB046
Pathway
siv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
siv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SSIL_3259
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
siv03400
]
SSIL_3259
DNA repair and recombination proteins [BR:
siv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SSIL_3259
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SSIL_3259
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
P-loop_SecA
AAA
COG5_N
CsgA
AAA_30
AAA_7
AAA_22
AAA_16
HerA_C
UB2H
PMT2_N
TrwB_AAD_bind
AAA_25
DUF87
AAA_19
Motif
Other DBs
NCBI-ProteinID:
BAK17682
UniProt:
F2F2Z4
LinkDB
All DBs
Position
complement(3335263..3337245)
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AA seq
660 aa
AA seq
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MTETFTIKSAYQPAGDQPEAIKQLIQGVKEGKRHQTLLGATGTGKTFTISNVIKEVNKPT
LVMAHNKTLAGQLYSEFKEFFPDNAVEYFVSYYDYFQPEAYVPQTDTYIEKDSSINEEID
KLRHSATTALFERKDVIIIASVSCIYGLGNPEEYREMVVSIRTGMEIERNQLLRKLVDIQ
YERNDINFTRGTFRVRGDVVEIFPASRDEHCIRIEFFGDEVDRIREVDALTGEILGDRQH
VAIFPASHFVTREEKMKIAIENIEKELEERLTTLRSEDRLLEAQRLEQRTNYDLEMMKEM
GFCSGIENYSRHLTLREAGATPYTLLDYFPEDFLLVVDESHVTLPQVRGMYNGDQARKGV
LVEHGFRLPSALDNRPLMFDEFQSKVSQAIYVSATPGPYELEHTPEMVEQIIRPTGLLDP
TIDIRPIEGQIDDLIDEIHERIRRNERTLVTTLTKKMSEDLSSYLKEMGLKVEYLHSEIK
TLERIEIIRELRKGTYDVLIGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGR
AARNSNGHVIMYANNMTDSMTKAISETKRRRETQMAYNEEHGITPKTIIKKIPDIIRATQ
AAEQEETYITKVTGGKKLTKKELEKLVATLQVEMKEAAKALDFERAAELRDMIFELKAEG
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaacttttacaataaagtccgcctatcagcctgccggggatcagccggaagcg
attaaacagctcatacagggagttaaagaaggcaagcgtcaccagacattgcttggggcg
acaggtacgggtaaaacatttacgatttccaatgtaattaaagaagtgaataagccgacg
cttgtgatggcacacaataaaacactggccggccaattatatagtgagtttaaagaattt
ttcccggacaatgcagttgaatatttcgtcagctactatgactatttccagccggaagcg
tatgtaccgcaaaccgatacgtacattgaaaaggattcaagtattaatgaagaaatcgat
aaattgcgccactcggcaacgactgctttgtttgaacggaaagatgtcattattatcgca
tctgtatcgtgtatttacggtctcggtaatccggaagaatatcgtgaaatggtcgtttcc
attcgtacagggatggaaatcgagcgcaatcagctattgcggaaactagtggacattcaa
tatgaacgaaatgatattaactttacacgcggtacgttccgagtacgcggggatgttgtc
gaaatttttccggcttcacgcgatgaacactgtatccgaatcgagtttttcggggatgaa
gttgaccggattcgtgaagtggatgcactgactggcgaaattttaggggaccgtcagcat
gtagctattttccctgcatcccacttcgttacccgtgaagagaaaatgaaaattgccatt
gaaaatatcgaaaaagagctggaggagcgtcttacaacattgcgttcggaagaccgttta
ctggaagcgcagcgcctggagcaacggacaaattatgatctggaaatgatgaaggaaatg
ggcttctgctcaggtatcgaaaactattcgcgccatttaacattgcgtgaagcaggggcg
acgccatatacattactcgattatttcccggaagactttttgcttgtcgttgatgaaagc
catgttacattaccgcaagtacgtggtatgtataatggagaccaggctcgtaaaggggta
ttggtcgagcatggcttccgtctgccgtccgcactcgataaccgtccgctcatgtttgac
gaatttcagtcgaaagtaagccaggcaatttatgtatcggcaacaccaggaccttatgaa
ttagagcatacaccggaaatggtggaacagattattcgtccgacagggctgcttgatccg
acgattgatatccgtccgattgaagggcaaattgatgatctgatcgatgaaattcatgag
cgaatccgtcgtaatgaacggacactcgtcacgacattgacgaagaaaatgtccgaagat
ttgtcgagctatttaaaagaaatgggcttgaaagtcgaatacttgcactcggaaatcaaa
acgctggaacggatcgaaattatccgggaacttcgtaaagggacgtatgatgtgctaata
ggtattaacttattaagggaaggtcttgatattcccgaagtatctcttgtcgcaattttg
gatgcggacaaggaagggttcctccgttctgaacgttcgcttattcaaactatcggacgt
gctgcgcgtaactcgaacggtcatgtcattatgtatgccaataatatgacggattcaatg
acaaaggcgatcagtgaaacaaagcgccgtcgtgaaacccaaatggcttacaatgaagaa
catggtattacaccgaaaacaatcattaaaaagattcctgatattatccgcgcaacacaa
gctgcggaacaggaagaaacatatattacaaaagtgacaggcggtaaaaagctgacgaaa
aaagagctggagaagcttgttgcgacattgcaagttgaaatgaaagaagccgcaaaagcg
ctggactttgaacgcgcggctgaactacgtgacatgatatttgaattgaaagcagaaggg
tga
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