Solibacillus silvestris StLB046: SSIL_3294
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Entry
SSIL_3294 CDS
T02162
Symbol
degU
Name
(GenBank) response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
KO
K07692
two-component system, NarL family, response regulator DegU
Organism
siv
Solibacillus silvestris StLB046
Pathway
siv02020
Two-component system
siv02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
siv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SSIL_3294 (degU)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SSIL_3294 (degU)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
siv02022
]
SSIL_3294 (degU)
Two-component system [BR:
siv02022
]
NarL family
DegS-DegU (multicellular behavior control)
SSIL_3294 (degU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
GerE
Sigma70_r4_2
HTH_23
Sigma70_r4
DUF5052
HTH_40
Motif
Other DBs
NCBI-ProteinID:
BAK17717
UniProt:
F2F329
LinkDB
All DBs
Position
complement(3370427..3371101)
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AA seq
224 aa
AA seq
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MTKIIIVDDHQLFREGVKRILDFEDTFEVVAEGDDGTDIVNLYEQNEPDVVLMDINMPGK
NGVEATADLLAVYPDAKVMVLSIHDDESYVTHALKSGALGYMLKEMDADEIVEAIKVVSN
GGSYLHPKVTKNLVAEFRRLSEHENKGNFHQTEIRRPFHLLTKRECEVLQLLTDGQSNRT
IGETLFISEKTVKNHVSSILQKMNVNDRTQAVVTAIKNGWVEVR
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaaattattattgtagatgatcaccaattattccgtgaaggggtaaaacgtatt
ttagattttgaagacacattcgaggttgttgctgaaggtgatgacggtacagatatcgta
aacttgtatgaacaaaacgaaccagatgtcgtattaatggatattaatatgccgggcaaa
aatggtgtagaagcaacagctgatttacttgctgtatatccggatgcgaaagtaatggtt
ttatcgattcatgatgatgaatcttatgtaacacacgcattaaaatcaggtgctcttggc
tatatgctgaaagaaatggatgccgatgaaatcgttgaagcaatcaaagttgtttcaaac
ggtggttcatacctgcacccgaaagtaacgaaaaatctagttgcggaattccgccgtctt
tcagaacacgaaaacaaaggtaatttccaccaaacagaaattcgtcgtccgttccactta
ttaacaaagcgtgaatgcgaagtgcttcaattattaacagatggccaatcaaaccgtaca
atcggtgaaacattattcatctcggaaaaaacggttaaaaaccatgtatcaagtatttta
caaaaaatgaatgttaatgaccgtacacaagcagttgtaacagcaatcaaaaacggctgg
gtagaagtacgttaa
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