Solibacillus silvestris StLB046: SSIL_3482
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Entry
SSIL_3482 CDS
T02162
Name
(GenBank) superfamily I DNA and RNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
siv
Solibacillus silvestris StLB046
Pathway
siv03420
Nucleotide excision repair
siv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
siv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SSIL_3482
03430 Mismatch repair
SSIL_3482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
siv03400
]
SSIL_3482
Enzymes [BR:
siv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SSIL_3482
DNA repair and recombination proteins [BR:
siv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SSIL_3482
MMR (mismatch excision repair)
Other MMR factors
SSIL_3482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_22
UvrD_C_2
PhoH
AAA_30
Viral_helicase1
SLFN-g3_helicase
AAA_16
DEAD
NACHT
Motif
Other DBs
NCBI-ProteinID:
BAK17905
UniProt:
F2F8A1
LinkDB
All DBs
Position
complement(3601937..3604297)
Genome browser
AA seq
786 aa
AA seq
DB search
MKADFLNEQKRLNSVVNVIDDQTLQLESETLKLRNEVVNTRKHFWDEIKVNTDSFDDFLE
TVINLRQEAQALAVGESTHHHASKRLAVLHRMKSVPYFGRIDFLEEGFSEQEKIYIGISS
LMDASGEDFLIYDWRAPISSIYYDYEPGPAQYTTPGDKVYGDLKEKWQYVIRDGKLQSMF
DTSLTIGDEILQKVLGKGADKYMQSIVATIQMDQNRIIRHDQGRMLIVHGAAGSGKTSAA
LQRIAFLLYKYRDRIKADQIILFSPNAMFNSYVSNVLPELGEENMQQVTFQEYLDHRLSK
DFHLENPYHQLEYVLTAANSPSYSARIKGIQFKASVKYVEAIKLYRETLEKSDLLFKDIK
FRGKTIISAQQLSEKFYGDHISLSFQSRLEKLKDWLMNKIKEIEKVERSQPWVEEEIELL
SDETYHKIHKYLAKKKGFEREEQADYEMDHDALIQVIVRLKLKVVRKQIQTLDFIDLEGV
YKQLFTNPLLMQQRLKVEVPDEWEAICEDTLQMMEAGTLYYEDATPFLFLQELIQGFQTN
RSIKHILIDEAQDYSPFQFEFLKRLFPSAKMTVLGDFNQAIFAHASGVVDFQVLNHLYGE
EETEVVNMNRSYRSTKPIIEFTRRLIANGEKIIPFERAGGLPVLNQVENHTELHQRIMSK
ISELQSEGYGSIAVICKSAEESKTAFEALNKIDGIKLIKSGTAEFEQGIVVIPSYLAKGI
EFEAVIIYDVSENVYGDESLRRIFYTACTRAMHVLQLYSVGKPSPFMQKPLKENLVQLEL
NSESLR
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcagatttcctgaacgaacaaaagaggttaaatagtgttgtgaacgtaattgat
gatcaaacacttcaactggaatcagaaacgttaaagctccgaaatgaagtagtaaatact
cgtaagcatttttgggatgaaataaaagttaatacggattcgtttgatgactttttggaa
accgtgattaacttaagacaagaagcacaggcattagctgtaggcgaaagtacgcaccat
cacgcatccaaaagattagctgtcttgcatcggatgaagtcagtcccttattttggacga
attgattttcttgaagaaggtttttcagagcaggagaaaatttatattgggatttcatct
ttgatggatgcaagtggtgaggacttccttatttatgactggagagcaccgatttcaagc
atctactatgattatgagcctggtcccgcacagtatacaacgcctggagacaaggtttac
ggtgatctcaaggaaaagtggcaatacgttattcgtgatggaaaactgcaatctatgttt
gacacaagtctcacgattggtgacgaaattttacagaaggtgcttggaaaaggcgcggat
aagtatatgcaaagtatcgtagcaacgattcaaatggatcaaaaccgtattatacgccat
gatcaagggcgtatgctcattgtgcacggtgcagcaggcagtggtaaaacttctgctgca
ttacaaagaatcgcatttctattatataaataccgggaccgtataaaagccgaccaaatt
atattattttcaccaaatgctatgtttaatagctatgtttccaacgtacttccggagctc
ggggaagagaatatgcagcaagttacattccaggaatatttggatcaccgtttaagtaaa
gattttcacttagaaaatccatatcaccaattggaatatgtgctgactgcagcaaatagc
ccttcgtatagcgcaagaataaaaggcattcaatttaaagcatctgttaaatatgttgag
gcaattaaattataccgtgaaactttggaaaaatcggacctactatttaaggatataaag
ttcagagggaaaacaatcatatcagcccagcaattgtcagagaagttttatggggatcat
atttcactgagcttccaaagcagacttgaaaaactgaaagactggctaatgaataaaatt
aaagaaattgaaaaagttgaacgttctcagccatgggtagaggaagaaattgagctacta
agtgatgagacatatcataaaattcacaaatatttagcgaagaaaaaaggctttgaacga
gaagagcaggcagattacgaaatggatcatgacgcacttattcaagtaatcgtccgcctg
aaattgaaggtagtgagaaaacaaattcaaacactcgactttattgatttagaaggcgtg
tataaacagctttttacaaatccattattgatgcaacagcgattaaaagtagaagtacca
gatgagtgggaagcaatatgcgaagatacactgcaaatgatggaggcgggaacgctgtat
tatgaagacgcgacaccatttctgtttttgcaggaattgattcaaggctttcaaacgaac
cgttcgatcaagcatattctcattgatgaagcgcaggattattcgccgtttcaatttgaa
tttctgaagcgcttattcccttctgccaaaatgacagtgctaggtgattttaatcaggct
atttttgctcatgcgagtggagtggtagattttcaagtacttaaccacctctatggagaa
gaagagacggaagttgtcaacatgaaccgaagttatcgttcgacaaagccaattattgaa
tttacacggagacttattgcaaatggagaaaaaatcattccatttgagcgcgcaggcggg
ttgccggtattaaaccaagtggagaatcatacagaattgcatcagcgtattatgtctaaa
atttcggaattgcaaagtgaaggttatggcagtatcgcagttatttgcaaatcagcagaa
gaaagtaagacagcatttgaggcgttaaataaaattgacggaattaaactgataaaaagt
ggtacagcggaattcgagcaaggaattgtagtcattccttcttatttagcgaagggaatt
gaatttgaagcggtcatcatttatgacgtatccgaaaacgtatatggagacgaaagttta
cgcagaattttttatacagcctgtacaagagcgatgcacgtgctacaactatatagtgta
gggaaaccgagtccttttatgcaaaagcctttaaaagagaaccttgtacaacttgagttg
aattcagaaagccttaggtaa
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