Stappia indica: GH266_02285
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Entry
GH266_02285 CDS
T06350
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
siw
Stappia indica
Brite
KEGG Orthology (KO) [BR:
siw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
siw03016
]
GH266_02285 (rnd)
Enzymes [BR:
siw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
GH266_02285 (rnd)
Transfer RNA biogenesis [BR:
siw03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
GH266_02285 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
QGZ33432
UniProt:
A0A857C4B1
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All DBs
Position
496529..497767
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AA seq
412 aa
AA seq
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MHIISSTKELADVCRRLAQHDFVAVDTEFLRETTFWPKLCVIQMASVEDAVIVDALADGL
DLAPFFELMRDESVVKVFHAARQDIEIVYHLGGFIPHPVFDTQVAAMVCGFGDSISYDQL
VHRITAVRIDKSSRFTDWSRRPLSEKQLDYALADVTHLREVYHFLKANLAEQGRSHWVGD
EMEILTSENTYRTDPENAWKRLKLRVRKPIEFAVLQEVAAWREREAHERDVPRNRILKDD
AIYEIAAQQPTNTQALAALRTIPRGFERSRTAEEILGAVKRAMAIPKDNLPAVPKGRAAP
DGSAAAVDLLKVLLKLISEAHGVAAKVIATMEDLEKIAASDDADVDALKGWRMELFGEAA
LKLKRGEIALAFNGKRIVAVEQSEPVLAPKPEPSKRRRNRQKADADADAAAD
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcatatcatttcaagcaccaaagaactggccgacgtgtgtcggcgtctcgcgcaacac
gatttcgtcgctgtcgacacggagttcctgcgcgaaacgaccttctggccgaagctctgc
gtcatccagatggcgagcgtcgaggatgccgtgatcgtcgacgcgctcgcggacggtctg
gatctcgcgccgtttttcgagctgatgcgcgacgagagcgtcgtgaaggtgttccatgcc
gcaaggcaggacatcgagatcgtctatcacctcggcgggttcatcccgcacccggtgttc
gacacccaggtcgcggcaatggtctgcggcttcggcgattcgatttcctacgaccagctg
gtccaccgcatcacggcggtcaggatcgacaagtcgtcgcgcttcaccgactggtcccgc
cggcccttgagcgaaaagcagctcgactatgcgctggccgacgtgacgcacctgcgtgag
gtctaccatttcctgaaggcgaacctcgccgaacagggtcgcagccattgggtgggcgac
gagatggagatcctcacctcagagaacacctatcgcaccgatcccgaaaatgcgtggaag
cggctgaagctgcgggtgcgcaagccgatcgagttcgcggtgctgcaggaggtcgccgcc
tggcgcgagcgcgaggcgcatgagcgcgacgtgccgcgcaaccgcatcctcaaggacgac
gcgatctacgagatcgccgcccagcagccgaccaacacccaggcgctcgctgccctgcgg
accattccccgcggcttcgagcgctcgcgcacggccgaggaaatcctcggcgcggtcaag
cgggcgatggcgatccccaaggacaacctcccggccgtgcccaaggggcgcgccgcgccc
gacgggtcggcggcggccgtcgaccttctcaaggtcctgctcaagctgatcagcgaggcc
cacggcgttgccgccaaggtcatcgcaaccatggaagacctggagaagatcgccgccagc
gacgatgccgatgtcgacgcattgaagggctggcggatggagctgttcggcgaagccgcc
ttgaagctgaagcgcggcgagatcgccctcgccttcaacggcaagcggatcgtcgccgtg
gagcagagcgagcctgttctggctccgaagcccgagccgtccaagcgtcgccgcaaccgg
cagaaggcggacgcggatgcggacgcagcagccgattag
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