Stappia indica: GH266_04255
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Entry
GH266_04255 CDS
T06350
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K07506
AraC family transcriptional regulator
Organism
siw
Stappia indica
Brite
KEGG Orthology (KO) [BR:
siw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
siw03000
]
GH266_04255
Transcription factors [BR:
siw03000
]
Prokaryotic type
Helix-turn-helix
AraC family
GH266_04255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
HTH_23
TetR_N
AraC_binding_2
HTH_31
HTH_28
HTH_7
HTH_Tnp_1
HTH_NPRL3
HTH_11
CENP-B_N
HTH_29
Motif
Other DBs
NCBI-ProteinID:
QGZ33787
UniProt:
A0A857C4B6
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All DBs
Position
913631..914545
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AA seq
304 aa
AA seq
DB search
MNAVAPSRDRLGCRATDLARDEELALNDVTFLRKTSCSATPVKVETPPTGQGLVLGMSLG
DEHWRDIRAGKAAHRHHFQRNSLYLRDFEIAYRAELGGQFDFLLVEIPWERFLPQDETRP
RVMPRRIDFETGTTDPTVTHLLSAIQPMLSGQQPRDQLFIDQVAEALVTYLRHRYARTSL
PERPREHRPSPLIRQALEILRTSLDGNVSLDDIARRCNVSRSHFYQVFRQELGCTPHEWL
VRTRLEQARALLRRPGLSLADIAAQCGFADQSHFTRAFGRRFGLSPGRWRAEHGAASSRE
PASG
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctgtcgcaccgtcccgcgatcgtcttggctgccgtgcaacggacctggcacgg
gacgaggagctggccctgaacgacgtcaccttcctgcgcaagacctcgtgcagtgcaacg
ccggtcaaggtcgagacgccaccgaccggacagggcctcgtcctcggcatgtcgctgggc
gacgagcattggcgcgacattcgcgccggcaaggcggcgcatcgccaccacttccagcgc
aacagcctttatttgcgcgacttcgagatcgcctaccgggcggagctcggcggccagttc
gacttcctgctggtggagatcccctgggagcgctttctcccgcaggacgagacgaggccg
cgcgtgatgccgcgccggatcgatttcgagaccggcaccaccgatcccacggtcacccat
ctgctttccgccatccagccgatgctgtccggccagcagccgcgcgaccagctcttcatc
gatcaggtggcagaggcgctcgtcacctacctgcgtcatcgctacgcccgcaccagcctc
ccggagcgcccccgtgagcatcgcccctccccgctgatccgccaggcgctggagatcctg
cgcaccagcctggacggcaacgtctcgctcgacgacatcgcccggcgctgcaatgtctcg
cgctcgcatttctaccaggtcttccgccaggaactcggctgcacaccgcacgagtggctg
gtcaggacacggttggagcaggcccgcgccctgctgcgccggcccggcctgtcgctggcc
gacatcgccgcccaatgcggcttcgccgaccagagccacttcacccgcgccttcggccgc
cgcttcggcctgtcgccagggcgctggcgggcggagcacggcgccgcaagctcgagagag
ccggcctcggggtag
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