Stappia indica: GH266_04700
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Entry
GH266_04700 CDS
T06350
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
siw
Stappia indica
Pathway
siw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
siw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GH266_04700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
siw03021
]
GH266_04700
03400 DNA repair and recombination proteins [BR:
siw03400
]
GH266_04700
Enzymes [BR:
siw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GH266_04700
Transcription machinery [BR:
siw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GH266_04700
DNA repair and recombination proteins [BR:
siw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GH266_04700
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF4249
Motif
Other DBs
NCBI-ProteinID:
QGZ33868
UniProt:
A0A285TN95
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Position
complement(1007007..1008029)
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AA seq
340 aa
AA seq
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MSIHKNWQELIKPNKLEVKPGHDPRVVGTVVAEPLERGFGLTLGNALRRVLLSSLQGAAV
TAVQIDGVLHEFSSIPGVREDVTDIVLNIKEIALRMQGEGPKRMVVRKQGPGVVTAGDIQ
TVGDIEVLNPDLVLCTLDEGAEIRMEFTVNTGKGYVPAERNRPEDAPIGLIPVDSLYSPV
KKVSYKVENTREGQVLDYDKLTLNVETDGSVSPEDSVAFAARILQDQLSIFVNFEEPRRE
VKEDTVPELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRK
SLNEIKEVLAQMGLHLGMEVANWPPENIDELAKRYEDHQY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
ttgagcattcacaaaaactggcaggaactgatcaagccgaacaagctcgaggtgaagccc
ggccacgacccgcgtgtcgtcggtacggtcgtcgccgagccgcttgagcgcggcttcggt
ctgacgctgggcaatgccctgcgccgcgtgcttctgtcctcgctccagggcgcggcagtg
acggcggtgcagatcgacggcgtcctgcacgagttctcgtccattccgggcgtgcgggaa
gatgtcaccgacatcgtcctgaacatcaaggaaatcgcgctgcgcatgcagggcgagggc
cccaagcgcatggtcgtgcgcaagcagggtccgggcgtggtgacggccggcgacatccag
acggtcggcgacatcgaggttctcaaccccgatctcgtcctttgcaccctcgacgagggc
gcggagatccgcatggagttcacggtcaacaccggcaagggctacgtgccggcggagcgc
aaccgtccggaagatgctccgatcgggcttatcccggtcgacagcctctactccccggtc
aagaaggtctcctacaaggtcgagaacacccgtgagggccaggttctcgactacgacaag
ctgaccttgaacgtggagaccgacggttcggtttctccggaagattccgtcgcatttgcg
gcgcgtatcctgcaggaccagctttcgatcttcgtcaacttcgaagagccgcgtcgcgaa
gtgaaggaggacaccgtccccgagctcgcgttcaacccggcgcttctgaagaaggtcgac
gagctggagctgtcggtgcgttcggccaactgtctgaagaacgacaatatcgtgtatatt
ggcgatctcattcagaagaccgaggcggagatgctgcgcaccccgaacttcggccgcaag
tcgctcaacgagatcaaggaagttctcgcccagatgggtctccatctcggcatggaagtg
gccaactggccgccggagaacatcgacgagctcgccaagcgctacgaggatcatcagtac
tga
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