Stappia indica: GH266_06305
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Entry
GH266_06305 CDS
T06350
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
siw
Stappia indica
Pathway
siw00061
Fatty acid biosynthesis
siw00071
Fatty acid degradation
siw01100
Metabolic pathways
siw01212
Fatty acid metabolism
siw02024
Quorum sensing
siw04146
Peroxisome
Module
siw_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
siw00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
GH266_06305
00071 Fatty acid degradation
GH266_06305
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
GH266_06305
09145 Cellular community - prokaryotes
02024 Quorum sensing
GH266_06305
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
siw01004
]
GH266_06305
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
siw04147
]
GH266_06305
Enzymes [BR:
siw01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
GH266_06305
Lipid biosynthesis proteins [BR:
siw01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
GH266_06305
Exosome [BR:
siw04147
]
Exosomal proteins
Exosomal proteins of breast milk
GH266_06305
Exosomal proteins of breast cancer cells
GH266_06305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF7293
Motif
Other DBs
NCBI-ProteinID:
QGZ37257
UniProt:
A0A857CEI6
LinkDB
All DBs
Position
complement(1318078..1319703)
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AA seq
541 aa
AA seq
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MHTYLDTAAREHGRRPAMDFLGKGWTYAEIAALTDRAAAGLQAMGVVKGDKVGLCLPNTP
YYTIFYFAVLKIGGIVVNFNPLYVERELSFQARDSGTRIMVTMDLKVIYDKVEAVRREGT
LDRVIVCPMADILPQPKKLLFQLFKRGDRARVPQDAAHPRFSEVVGHGASPRVADIRPDT
DIAVLQYTGGTTGVPKGAMLTHTNLAANIEQMRSIFCEAKVGEEKMLCVLPFFHVFAMTV
AQNLSVVLAAEMVLMPRFELKMLLDTIRRKKITLFPGVPTIYTAINNSEMTKGYDLTTIR
LCISGGAPLPVEVKTQFEGLTGCILVEGYGLTEASPVVAANPLNENRRAGSIGLAIPGTV
LEFRSLENPSQCVPEGEKGELVVRGPQVMAGYYNRPEDTARAIENGALHTGDVGYRDPDG
FVYLVDRIKDLILCSGYNVYPRMIEEAIYQHPAVEETIVIAIPDPYRGQAPKAFIKLKPD
EHVSAEDLRQFLKGHLSPIELPQEIEFRDALPKTMVGKLSKKELVEEEKAKRAAAAAAPE
G
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgcacacctatctcgacacggccgccagggagcatggccggcgaccggccatggacttc
ctcggcaagggctggacctatgccgagatcgcggcgctgaccgaccgggcggcggccggc
cttcaggcgatgggcgtggtcaagggcgacaaggtgggcctgtgcctgcccaacacgccc
tactacacgatcttctatttcgcggtgctgaagatcggcggcatcgtggtgaacttcaac
ccgctctacgtggagcgggaactgtcgttccaggcgcgggacagcggcacgcgcatcatg
gtgaccatggatctcaaggtcatctacgacaaggtggaggcggtgcggcgcgagggaacg
ctcgaccgcgtcatcgtctgcccgatggccgatatcctgccccagcccaagaagctgctg
ttccagctgttcaagcgcggcgaccgggcgcgcgtgccgcaggatgccgcgcatccgcgc
ttttcggaagtcgtcggccacggcgccagcccgcgcgttgccgacatccgccccgatacc
gacatcgccgtgctgcaatacaccggcggcacgaccggcgttcccaagggggcgatgctg
acccacaccaaccttgccgcgaatatcgagcagatgcgctcgatcttctgcgaggcgaag
gtcggcgaggagaagatgctctgcgtgctgccgttcttccacgtcttcgcgatgacggtg
gcgcaaaacctctcggtggtgctggcggccgagatggtgttgatgccgcgcttcgagctg
aagatgctgctcgacacgatccggcgaaagaagatcacgctgtttcccggcgtgccgacc
atctacaccgcgatcaacaattccgagatgaccaagggctacgatctcaccacgatccgg
ctgtgcatctccggcggcgcgccgcttccggtggaggtgaagacccagttcgaggggctg
accggctgtatcctggtggaaggctacggcctgaccgaagcctcgcccgtggttgcggcg
aacccgctcaacgagaaccgccgggcgggctccatcggccttgccattcccggcacggtg
ctggaattccgcagcctggaaaacccgtcccaatgcgtaccggagggcgagaagggcgaa
ctcgtggtgcgcgggccgcaggtgatggccggctactacaatcgcccggaagatacggcc
cgggccatcgagaacggcgccttgcatacgggcgatgtcggttaccgcgatccggacggc
ttcgtctatctggtcgaccggatcaaggacctgatcctgtgctcgggctacaacgtctat
ccgcggatgatcgaggaggcgatctaccagcatccggcggtggaagagacgatcgtcatc
gccattcccgacccctatcgcggccaggcgcccaaggccttcatcaagctgaagccggac
gagcacgtctccgccgaggatctccggcagttcctgaaaggccacctgtcgccaatcgag
ttgccgcaggagatcgagttccgcgacgccctgcccaagacgatggtcggcaagctgtcc
aagaaggagttggtggaggaggagaaggcgaagcgggccgccgccgccgctgcccctgaa
ggctga
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