Stappia indica: GH266_08470
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Entry
GH266_08470 CDS
T06350
Name
(GenBank) LysR family transcriptional regulator
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
siw
Stappia indica
Brite
KEGG Orthology (KO) [BR:
siw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
siw03000
]
GH266_08470
Transcription factors [BR:
siw03000
]
Prokaryotic type
Helix-turn-helix
LysR family
GH266_08470
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_24
PBP_like_2
MarR_2
HTH_IclR
HTH_30
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
QGZ34537
UniProt:
A0A857C6K8
LinkDB
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Position
complement(1798924..1799859)
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AA seq
311 aa
AA seq
DB search
MERNKFDLEDLRVFSSLATGGRFRAVADEIGMSASALSRQIARLEERLGTRLFNRDTRNV
SLTPQGHTLLRLAQQVLNTAANAGAEFDAYLAARRGRLTIAGLPSVTAGLLPSLVARFLA
RHPDIDVQINDALSDSVIRSVEQGESDLGFTAGAVENSDRISFRTLLSDPFVAVGAAGGI
LEDRDSCTWRELSEMPLVAMAKGTSVRLLIDAACSQQNLPFRPRFEVAHLATAGAFVSQG
LGVTALPVLTLPVLSSGNLIYRRLVEPEVLRHVGIIWRAGHVLSPAATAFLDLVRGVDLS
SEVPDPFGPGG
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcaacaaattcgatctggaggatctgcgggtcttttccagcctcgccaccggc
gggcggtttcgcgccgtcgccgacgagatcggcatgtccgcctccgccctcagccgccag
atcgcccggctggaggagcggctcggcacgcgcctgttcaaccgcgacacgcgcaatgtc
tcgctgaccccgcagggccataccctgttgcggctggcgcagcaggtgctcaacaccgcg
gccaatgcgggggcggagttcgacgcctatctcgcggcccggcgcggccggctgaccatt
gccggcctgccctcggtgaccgccggcctgctgccctcgctggtcgcgcggtttctcgcc
cgccatcccgatatcgacgtgcagatcaacgatgcgctgtccgacagcgtcatccgctcg
gtcgagcagggcgagtccgatctcggcttcaccgccggcgcggtggaaaattccgaccgg
atctcgttccgcaccctcttgtcggacccgttcgtggcggtgggagcggccggcggcatt
ctggaggatcgcgacagctgcacctggcgggagctcagcgaaatgccgctggtcgccatg
gcgaagggcaccagcgtgcggcttttgatcgacgcggcctgctcgcagcagaacctgccg
ttccgcccgcgcttcgaggtggcgcatctggccactgccggcgccttcgtgtcccagggg
ctgggcgtcaccgccctgccggtcctgacgctgccggtgctgagttcgggaaatctgatc
tatcgccggctggtggagccggaggtgctgcgccatgtcggcatcatctggcgggccggc
catgtgctgtcgccggccgccaccgcctttctcgacctggtgcgcggcgtcgatctctcc
agcgaggtgccggacccgttcgggcccggcggctga
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