Stappia indica: GH266_09975
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Entry
GH266_09975 CDS
T06350
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
siw
Stappia indica
Brite
KEGG Orthology (KO) [BR:
siw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
siw03021
]
GH266_09975 (rpoH)
Transcription machinery [BR:
siw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GH266_09975 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_11
Sigma70_r4_2
wHTH-HSP90_Na-assoc
GntR
Sigma70_r3
Motif
Other DBs
NCBI-ProteinID:
QGZ34817
UniProt:
A0A857C7E4
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Position
2119985..2120887
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AA seq
300 aa
AA seq
DB search
MAQNIPALSSGEGGLSRYLDEIRRFPMLEPQEEYMLAKRYKEHGDPAAAERLVTSHLRLV
AKIAMGYRGYGLPISEVVSEGNVGLMQAVKRFEPDKGFRLATYAMWWIKAAIQEYILRSW
SLVKMGTTANQKRLFFNLRRLKGRIQALDEGDLRPEHVTQIATKLGVSEEEVVSMNRRLA
GDASLNAPIRAEADSGEWQDWLVDESDSQEAIFAQQEELDQRRKLLGDAMEVLNDRERRI
FEARRLSEDPITLEDLSTEFGVSRERVRQIEVRAFEKVQKAVRRGARELEQPQAQIAGQA
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcccagaacattccggcgctgagttccggcgaaggcggtctcagccgatatctggac
gaaatccggcggtttccgatgctggaaccgcaggaagaatacatgctcgccaagcgctac
aaggagcatggcgacccggccgcagccgagcggctggtgacttcgcatctgcgcctcgtc
gccaagatcgccatgggctatcgcggctacggcctgccgatttccgaggtcgtgtcggag
ggcaatgtcggcctgatgcaggcggtcaagcgcttcgagcccgacaagggcttccgtctc
gccacctatgccatgtggtggatcaaggcggcgatccaggagtacatcctgcggtcctgg
tcgctcgtgaagatgggcaccaccgccaaccagaagcgtctcttcttcaacctgcgccgg
ctcaagggccgcattcaggcgctcgatgagggcgaccttcgccccgagcacgtgacccag
atcgccaccaagctcggcgtcagcgaggaggaggtcgtctcgatgaaccgccggctcgcc
ggcgacgcctcgctcaatgcgccgatccgcgcggaggccgacagcggcgagtggcaggat
tggctcgtcgacgagagcgacagccaggaggcaatcttcgcccagcaggaagagctggac
cagcggcgcaagctgctcggcgacgcgatggaggtcctgaacgaccgcgagcggcggatc
ttcgaggcccggcgcctgtcggaggatccgatcacgctcgaggacctgtcgaccgagttc
ggcgtcagccgcgagcgcgtgcgccagatcgaggttcgcgccttcgagaaggtccagaag
gcggtgcgccgcggcgcccgcgagctggaacagccgcaggcccagatcgccggccaggcc
tga
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