Stappia indica: GH266_13490
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Entry
GH266_13490 CDS
T06350
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
siw
Stappia indica
Pathway
siw03030
DNA replication
siw03410
Base excision repair
siw03420
Nucleotide excision repair
siw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
siw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GH266_13490 (polA)
03410 Base excision repair
GH266_13490 (polA)
03420 Nucleotide excision repair
GH266_13490 (polA)
03440 Homologous recombination
GH266_13490 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
siw03032
]
GH266_13490 (polA)
03400 DNA repair and recombination proteins [BR:
siw03400
]
GH266_13490 (polA)
Enzymes [BR:
siw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GH266_13490 (polA)
DNA replication proteins [BR:
siw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GH266_13490 (polA)
DNA repair and recombination proteins [BR:
siw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GH266_13490 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GH266_13490 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
Taq-exonuc
DNA_polI_exo1
HHH_5
HHH_2
DUF4644
Motif
Other DBs
NCBI-ProteinID:
QGZ35418
UniProt:
A0A857C973
LinkDB
All DBs
Position
complement(2862906..2865923)
Genome browser
AA seq
1005 aa
AA seq
DB search
MIRAMSNEAASALTADDHLILVDGSTFIFRAYHALPPLTRKSDGLPVGAVSGFCNMLWKL
LQEGLTPEEGDEPTHMAVIFDHSAKTFRNEIYPQYKAQRPEPPEDLIPQFGLIREATRAF
SVHCIEQEGFEADDLIATYARAAAAAGARVTIASGDKDLMQLIGPRIGMIDTMKNKIFGE
AEVFEKFGVGPDKVIEVQALAGDSVDNVPGVPGIGLKTAALLVSEFGDLETLLSKADTIK
QAKRRENLIAFADQARISKQLVTLKEDVPVEQPVETLTVNGLDGTRAIAFLKAMEFTTLT
RRVAEVTGLDIAGVEPATLVVRGWHEPDGKGRMMEGGPGTQPEGTAASSDTPASGSTPSA
SASAAAGEGGLWRPQAVAEAAAAQAAAQKVDPSGYETVMDLDRLKAWVAEATELGHVAVD
TETTSLDAMQAELVGVSLATQPGRACYIPLGHVDGEGDLLGGGGLIPGQIAMGEALAVLK
PLLEDPGVLKIAQNLKYDWLVLKRYGIEIAPFDDTMLLSYALDAGKGGNGMDALSERWLG
HTPIPFKEVAGSGKSMITFDKVPLDKASAYAAEDADVTLRLWQVLKPRLAAEHMAGVYER
LERPMVPVLARMEERGISIDRQMLSRLSGDFAQGMAALESEIHELAGESFNIGSPKQLGD
ILFGKMGLPGGKKTKTGAWSTSVSVLDDLAAEGHELPSRIVEWRQLSKLKSTYSDALPGF
VNPQTGRVHTSYALAATTTGRLSSSEPNLQNIPVRTEAGRKIRKAFVAEKGMKLVSADYS
QIELRVLAHMADIGQLKQAFSEGLDIHAMTASEMFGVPIEGMDPMVRRRAKAINFGIIYG
ISAFGLAAQLGIPRGEAAEYISTYFKRFPGIRDYMEETKKFVHANGYVTTIFGRRAHYPE
VNTSNPNHRAFYERAAINAPIQGSAADILRRAMIRMEDRLSASRLTARMLLQVHDELIFE
VPEAEVGTTIALVREVMETAAEPAVTLSVPLHVDARAADNWDEAH
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcgccatgtcgaacgaagccgcctccgccctcaccgccgacgaccacctgatc
ctggtcgacggctccacgttcatcttccgcgcctatcacgcgctgccgcccttgacgcgc
aagtccgacggcctgccggtcggtgcggtctccggcttctgcaacatgctgtggaagctg
ctgcaggaagggctgaccccggaggaaggcgacgagccgacccatatggcggtgatcttc
gaccattcggcgaagacgttccgcaacgagatctatccccagtacaaggcccagcgcccg
gagccgccggaggacctgatcccccagttcggcctgatccgcgaggccacacgcgccttt
tcggtccattgcatcgagcaggaaggcttcgaggccgacgacctgatcgccacctatgcc
cgcgcggcggcggcggcgggcgcgcgggtcaccatcgcctccggcgacaaggacctgatg
cagctgatcggtccgcgcatcggcatgatcgacaccatgaagaacaagatcttcggcgag
gccgaggtgttcgagaaattcggcgtcggtccggacaaggtgatcgaggtccaggcgctg
gccggcgacagcgtcgacaacgtgccgggcgtaccgggcatcggcctgaagaccgccgcc
ctcctggtcagcgagttcggcgacctggagacgctgctgtccaaggccgacacgatcaag
caggccaagcgccgcgagaacctcatcgcctttgccgaccaggcgcgcatctccaagcag
ctggtgacgctgaaggaggacgtgccggtcgagcagccggtggagacgctcaccgtcaac
gggctcgacggcacccgcgccatcgccttcctcaaggcgatggagttcaccaccctgacc
cgccgggtcgccgaggtcaccggcctcgacattgccggcgtcgagccggccaccctcgtc
gtgcgcggctggcacgagcccgacggcaagggtcggatgatggagggcggccccgggacc
cagccggaaggtactgccgccagctcggacaccccggcaagcggatcgacaccatcggcc
tccgcatccgctgcagccggcgagggcggattgtggcgcccgcaggcggttgccgaggcc
gccgccgcacaggccgccgcgcagaaggtcgacccgtccggctacgagacggtgatggat
ctcgaccggctgaaggcctgggtcgcggaggcgaccgagctcggccatgtggcggtcgac
acggaaacgacctcgctcgatgccatgcaggccgaactcgtcggcgtgtcgctggcaacg
cagccgggacgcgcctgctacatcccgctcggtcatgtggacggcgagggcgacctgctc
ggcggcggcggcctgatccccggccagatcgccatgggcgaggcgcttgccgtgctcaag
ccgctgctggaggaccctggcgtcctcaagatcgcgcagaacctcaagtacgactggctg
gtgctgaagcgctacggcatcgagatcgcccccttcgacgatacgatgctgctgtcctat
gcgctggatgccggcaagggcggcaacggcatggacgcgctttccgagcgctggctcggc
cacacgccgatcccgttcaaggaagtcgccggctccggcaagtcgatgatcaccttcgac
aaggtgccgctcgacaaggcctccgcctatgcggcggaggatgccgacgtcaccctgcgc
ctgtggcaggtgctcaagccgcggcttgcggcggagcacatggccggcgtctacgagcgg
ctggagcggccgatggtgccggtgctcgcccgcatggaggagcgcggcatctccatcgac
cggcagatgctgtcgcgcctgtccggcgatttcgcgcaaggcatggcggcactggaatcc
gagatccacgagctcgccggcgagagcttcaacataggcagcccgaagcagctcggcgac
atcctgttcggcaagatgggcctgcccggcggcaagaagaccaagaccggcgcctggtcg
acctcggtctccgtgctcgacgacctggccgccgaagggcacgagctgccttcgcgcatc
gtcgaatggcggcagctctccaagctcaagtccacctattcggacgcgctgcccggcttc
gtcaatccgcagaccgggcgcgtgcacacgtcctacgcgctggcagcgacgacgaccggc
cgcctgtcctcgtccgagccgaacctgcagaacattccggttcgcacggaagccggccgc
aagatccgcaaggccttcgtcgccgagaagggcatgaagctggtctcggccgactacagc
cagatcgagctgcgcgtgcttgcccacatggccgacatcggccagctcaagcaggccttc
tccgaagggctcgacatccatgccatgaccgcttcggaaatgttcggcgtgcccatcgag
ggcatggacccgatggtccgccgccgggccaaggcgatcaatttcggcatcatctacggc
atctcggccttcggtctcgccgcccagctcggcatcccgcggggcgaggcggcggagtac
atctcgacctatttcaagcgcttcccgggcattcgcgactacatggaggagacgaagaag
ttcgttcatgccaatggctacgtgacgacgatcttcggccgccgggcgcattatccggag
gtgaacacctccaacccgaaccaccgcgccttctacgagcgcgcggcgatcaacgcgccg
atccagggctcggccgccgacatcctgcgccgggcgatgatccgcatggaggaccggctg
tcggcctcaaggcttaccgcccgcatgctgctgcaggtgcatgacgagctgatcttcgag
gtgccggaagcggaggtgggcacaaccatcgccctggtgcgcgaggtcatggaaacggcg
gccgaaccggccgtgacgctctccgtgccgctgcatgtggatgcccgcgccgccgacaac
tgggacgaggcgcactga
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