Stappia indica: GH266_15255
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Entry
GH266_15255 CDS
T06350
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
siw
Stappia indica
Pathway
siw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
siw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GH266_15255 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
siw03019
]
GH266_15255 (pnp)
03016 Transfer RNA biogenesis [BR:
siw03016
]
GH266_15255 (pnp)
Enzymes [BR:
siw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
GH266_15255 (pnp)
Messenger RNA biogenesis [BR:
siw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GH266_15255 (pnp)
Transfer RNA biogenesis [BR:
siw03016
]
Prokaryotic type
tRNA degradation factors
GH266_15255 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
QGZ35730
UniProt:
A0A857C9P4
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All DBs
Position
3246228..3248345
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AA seq
705 aa
AA seq
DB search
MFDIHRVEVDWGGRPLILETGKIARQADGAVLATYGETKVLATVVSAKEPKPGQDFFPLT
VNYQEKAFAAGKIPGGYFKREGRPSEHETLTSRLIDRPIRPLFVAGFKCDTQVVATVLSH
DMENAPDIVAMVAASAALTISGVPFMGPIGGARVGYVNGEYVLNPLVDDMPESALDLIVA
GTGEAVLMVESEAKELDENIMLGAVMFGFKGFQPVIEAIVKLAETAAREPRELNLPDHSV
LAGRIKELAAGDLTAAYAIREKTDRRNAIDAVKAKTVETLAAEAGDAGIDKVVVGGLFKD
LEAEIVRGAILDKGERIDGRDLKTVRPIVSEAGILPRTHGSALFTRGETQALVVATLGTN
EDEQFVDALEGTYKSTFMLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAVHPLLPAHH
EFPYTLRVVSEVTESNGSSSMATVCGTSLALMDAGVPLKAPVAGIAMGLIKEDDRFAVLS
DILGDEDHLGDMDFKVAGTTTGITSLQMDIKIDGITEEIMRVALDQARDGRIHILGEMSQ
ALSEARAELGEHAPRIEVLKIPVDKIREVIGSGGKVIREIVEKTGAKVNIEDDGTVKVAS
SDGKAIKAAINWINSIAAEPEVGVIYEGRVVKTVDFGAFVNFFGAKDGLVHISQLAPQKV
AKTTDVVKEGDKVWVKLMGFDERGKVRLSMKVVDQETGQEIAAEA
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatattcatcgcgtggaagtggattggggcggtcgcccgctgatcctggagacg
ggcaagatcgcccgccaggccgacggcgccgtgctcgccacctatggcgagaccaaggtt
ctggccacggtggtttccgccaaggagccgaagcccggccaggacttcttcccgctgacc
gtgaactaccaggaaaaggccttcgccgccggcaagatcccgggtggctacttcaagcgc
gaaggccgtccgtccgagcacgagacgctgacctcgcgtctgatcgaccggccgatccgc
ccgctcttcgtcgccggcttcaagtgcgacacccaggtggtcgcaaccgtcctgtcgcat
gacatggagaatgcaccggacatcgtcgccatggttgcggcctccgccgccctgacgatc
tccggcgtgccgttcatgggcccgatcggcggcgcccgcgtcggctatgtgaacggcgaa
tacgtgctgaacccgctggtcgacgacatgccggaatcggcgctcgacctgatcgtcgcc
ggcaccggcgaagcggttctgatggtcgagtccgaggccaaggagctggacgagaacatc
atgctcggcgccgtgatgttcggcttcaagggcttccagccggtgatcgaggcgatcgtc
aagctggccgagaccgccgcccgcgagccgcgcgagctcaacctgccggatcactccgtg
cttgccggccgcatcaaggagctggctgccggcgacctgacggccgcttatgccatccgc
gagaagaccgaccgccgcaacgccatcgacgcggtcaaggccaagacggtcgagacgctg
gccgccgaggccggtgacgccggcatcgacaaggtcgtcgtcggcggcctgttcaaggac
ctggaggcggagatcgtccgcggcgccatcctcgacaagggcgagcgcatcgacggccgc
gacctgaagacggtccgtccgatcgtctccgaggccggcatcctgccgcgcacccacggt
tcggccctgtttacccgcggcgagacccaggcgctcgtcgtcgcgacgctcggcaccaac
gaggacgagcagttcgtcgacgcactggaggggacctacaagtccaccttcatgctgcac
tacaacttcccgccctactcggtcggcgagaccggccgcatgggttcgcccggccgccgc
gagatcggccatggcaagctcgcctggcgcgcggtgcacccgctcctgccggcgcatcac
gagttcccgtacacgctgcgtgtcgtttccgaggtcaccgagtccaacggctcctcgtcg
atggcgaccgtctgcggcacctcgctggccctgatggatgccggcgtgccgctgaaggcg
ccggtggccggtatcgccatgggcctgatcaaggaagacgaccgtttcgcggtgctctcc
gacatcctcggcgacgaggatcacctcggcgacatggacttcaaggtggcgggcaccacg
accggcatcacctcgctgcagatggacatcaagatcgatggcatcaccgaggagatcatg
cgtgtcgcgctcgaccaggcgcgtgacggccgtatccacatcctcggcgagatgtcgcag
gccctgtccgaggcccgcgccgagctcggcgagcatgccccgcgcatcgaggtcctgaag
atcccggtcgacaagatccgtgaagtcatcggctcgggcggcaaggtcatccgcgagatc
gtcgagaagaccggcgccaaggtcaacatcgaggacgacggcaccgtcaaggtggcctct
tccgacggcaaggcgatcaaggccgcgatcaactggatcaactccatcgccgcggagccg
gaagtgggcgtgatctacgagggccgcgtcgtcaagaccgtggacttcggcgctttcgtc
aacttcttcggcgccaaggacggtctcgtccacatctcgcagctggccccgcagaaggtt
gccaagaccaccgacgtggtcaaggaaggcgacaaggtctgggtgaagctgatgggcttc
gacgagcgcggcaaggtccgcctgtcgatgaaggtcgtcgaccaggagaccggccaggag
atcgctgcggaggcctga
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