Stappia indica: GH266_15590
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Entry
GH266_15590 CDS
T06350
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
siw
Stappia indica
Brite
KEGG Orthology (KO) [BR:
siw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
siw03032
]
GH266_15590 (gyrB)
03400 DNA repair and recombination proteins [BR:
siw03400
]
GH266_15590 (gyrB)
Enzymes [BR:
siw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
GH266_15590 (gyrB)
DNA replication proteins [BR:
siw03032
]
Prokaryotic type
DNA Topoisomerases
GH266_15590 (gyrB)
DNA repair and recombination proteins [BR:
siw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GH266_15590 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
GyrB_insert
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QGZ35789
UniProt:
A0A857CA81
LinkDB
All DBs
Position
3320749..3323202
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AA seq
817 aa
AA seq
DB search
MSDTPTGSESEPQATNGADDYGADSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVYEVV
DNAIDEALAGHADRVTVTLNAEGSVTVTDNGRGIPTDVHSEEGVSAAEVIMTQLHAGGKF
DQNSYKVSGGLHGVGVSVVNALSTWLDLRIWRSGKEHRMRFRNGEAEAPLAVVGPAEGRK
GTEVTFMPSPETFTRIEFDFGTLEHRLRELAFLNSGVRILLTDRRGVEEKAVELFYEGGL
EAFVRYLDRAKHPLIEAPIVMRTEKDGITVEAAMWWNDSYHEQVLCFTNNIPQRDGGTHL
AGFRGALTRQMTGYAEQSGILKKEKVSLTGDDCREGLTCVLSVKVPDPKFSSQTKDKLVS
SEVRPVVENAISAALAEWLEENPAPARVLVSKIVEAASAREAARKARELTRRKGALDVAS
LPGKLADCQERDPAKSELFLVEGDSAGGSAKQGRSRENQAILPLRGKILNVERARFDKML
SSNEIGTLITALGTGIGKEEFNLAKLRYHKIIIMTDADVDGAHIRTLLLTFFFRQMPDLI
EQGHIYIAQPPLYKVKRGNSEQYLKDQEALENYLIDTGLEDCTLTLAGGEVRSGHDLRDV
VEKARAVAGILDGLHSRYDRDVVEQAAIAGALNPDVHDDPVRAAEAAAYIARRLDILADE
FERGWEGKVLDNGDLVFERTVRGVKEVATIDAALLGSADARKLDARTQNLQEVYVKAATL
ARKGSDTAIRGPRALLDAVFVQGRKGIAMQRYKGLGEMNAEQLWETTLDPNVRSLLQVKV
READAADDIFTKLMGDDVDPRRAFIQENALAVANLDV
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacactccgacgggcagcgaaagcgaaccgcaagccaccaacggcgcagacgac
tacggcgccgactcgatcaaggtcctcaagggcctcgatgcggtgcgcaagcgcccgggc
atgtatatcggcgacaccgacgacggttccggcctccaccacatggtgtacgaggtggtc
gacaacgccatcgacgaggccctggccggccacgcggaccgcgtcaccgtgacgctgaac
gccgaaggctcggtcaccgtgaccgacaacggccgcggcattcccaccgacgtgcactcc
gaggaaggcgtgtccgccgccgaggtcatcatgacccagctgcatgccggcggtaagttc
gaccagaactcctacaaggtgtcgggcggcctgcacggcgtcggcgtctcggtggtgaac
gccctgtcgacctggctcgacctgcgcatctggcgcagcggcaaagagcaccgcatgcgc
ttccgcaacggcgaggccgaggccccgttggccgtcgtcggcccggcggaagggcgcaag
ggcaccgaggtgaccttcatgccctcgcccgagaccttcacccgcatcgaattcgacttc
ggcacgctggagcaccggctgcgcgagctggccttcctgaactccggcgtgcgcattctc
ctgaccgaccgccgcggcgtcgaggagaaggcggtcgagctgttctacgaaggcggcctg
gaggccttcgtgcgctatctcgaccgggccaagcacccgctcatcgaggcgccgatcgtc
atgcggaccgagaaggacggcatcacggtcgaggcggccatgtggtggaacgacagctac
cacgagcaggttctgtgcttcaccaacaacatcccgcagcgcgacggcggcacgcatctg
gccggcttccgcggcgcgctgacccggcagatgaccggctatgcggagcagtcgggcatc
ctcaagaaggagaaggtctcgctcaccggcgacgactgccgcgagggactgacctgcgtg
ctctcggtcaaggtgccggacccgaaattctcgtcccagaccaaggacaagctggtttcg
tccgaggttcgcccggtggtcgagaacgccatcagcgccgcgctcgccgagtggctggaa
gaaaacccggcccccgcgcgcgtgctcgtctccaagatcgtcgaggcggcctcggcgcgc
gaggcggcgcgcaaggcgcgcgagctgacccggcgcaagggcgcgctggacgtcgcctcg
ctgcccggcaagctggccgactgccaggaacgcgacccggccaagtccgagctcttcctg
gtggagggcgattcggccggcggctccgcgaagcagggccgcagccgcgagaatcaggcg
atcctgccgctgcgcggcaagatcctcaatgtcgagcgggcgcgcttcgacaagatgctg
tcgtcgaacgagatcggcacgctgatcacagcgctcggcaccggcatcggcaaggaagag
ttcaacctcgccaagctgcgctaccacaagatcatcatcatgacggacgccgacgtcgac
ggcgcccacatccgcacgctgctgctgactttcttcttccggcagatgccggacctgatc
gagcagggccacatctatatcgcccagccgccgctctacaaggtcaagcgcggcaactcc
gagcagtaccttaaggaccaggaagcgctggagaactacctgatcgatacgggcctggaa
gactgcacgctgaccctggccggcggcgaggtgcgcagcggacacgacctgcgcgacgtg
gtcgagaaggcgcgggcggttgccggcattctcgacggcctgcattcgcgctacgaccgc
gacgtggtcgagcaggcggcgattgccggcgcgctgaaccccgacgtgcatgacgatccc
gtgcgtgcggcggaggcggcagcctatatcgcccgccggctggacattctggccgacgag
ttcgagcgcggctgggaaggcaaggtgctcgacaatggcgacctcgtcttcgagcggacc
gtgcgcggcgtgaaggaggtggcgaccatcgatgcggcgctgctcggctcggccgatgcc
cgcaagctggacgcccgcacccagaacctgcaggaggtctacgtcaaggccgcgacgctg
gcccgcaagggcagcgacacggccattcgcgggccgcgggcgctgctcgacgcggtgttc
gtgcaagggcgcaagggcatcgcgatgcagcgctacaagggtctcggcgagatgaacgcc
gagcagctctgggaaaccacgctcgatccgaacgtgcgctccctgctgcaggtgaaggtg
cgcgaggcggatgccgccgacgacatcttcaccaagctgatgggcgacgacgtcgacccg
cggcgcgccttcatccaggagaacgccctcgcggtcgccaatctggacgtctga
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