Stappia indica: GH266_20970
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Entry
GH266_20970 CDS
T06350
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K18098
LuxR family transcriptional regulator, quorum-sensing system regulator BjaR1
Organism
siw
Stappia indica
Pathway
siw02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
siw00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GH266_20970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
siw03000
]
GH266_20970
Transcription factors [BR:
siw03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
GH266_20970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
Sigma70_r4_2
Sigma70_r4
HTH_23
HTH_10
HTH_20
Sigma70_ECF
HTH_24
HTH_11
Motif
Other DBs
NCBI-ProteinID:
QGZ37549
UniProt:
A0A857CF68
LinkDB
All DBs
Position
4575782..4576483
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AA seq
233 aa
AA seq
DB search
MADPMETQSKAAAIAEAQTGKHVLDIVEAQLRRLGATHILVTGLPMPNRPIDGLVHRFRW
ADERAGGIERSDLDTEDGALMLGLMRNRAFVWDVTVGDMEHSELFASLGGETRVVVVPVT
ETHPFQAVVMGGGAHLDAGSVELSNLELICNTAFRRLIDLGVLSTQRPGDLSARERRVLE
LTALGKTASDIAGLLDISQRTVHAHLQNASAKLNASNKTHTVVEALRYGQIRL
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atggccgacccgatggagacgcagtccaaggcggcggcgattgccgaagcacagacgggc
aagcatgttctcgacatcgtcgaggctcagctgcgcaggctgggcgcgacgcatatcctg
gtgaccgggttgccgatgccgaaccggccgatcgacggcctggtccatcgtttccgctgg
gcggacgagcgggccggcggcatcgagcgcagcgacctcgacaccgaggacggcgcgctg
atgctgggcctgatgcgcaaccgggcattcgtctgggacgtgacggtgggcgacatggag
cattccgagctcttcgcatcgctcggcggcgaaacccgcgtggtggtggtgccggtgacc
gagacgcaccccttccaggcggtggtgatgggcggcggcgcgcatctcgatgcgggctcg
gtggaactgtccaatctcgagctgatctgcaacaccgccttccgccggctgatcgatctc
ggcgtcctgtcgacgcagcgcccgggcgatctctcggctcgcgagcggcgggtgctggag
ctcaccgcgctcggcaagaccgcgagcgacatcgccggcctgctcgacatctcgcagcgg
acggtgcacgcgcatctgcagaatgccagcgccaagctcaacgcctccaacaagacgcat
accgtggtcgaggcgctgcgctacggccagatccggctctga
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