Sinorhizobium sp. RAC02: BSY16_1408
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Entry
BSY16_1408 CDS
T04514
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
six
Sinorhizobium sp. RAC02
Pathway
six03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
six00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BSY16_1408 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
six03400
]
BSY16_1408 (uvrB)
DNA repair and recombination proteins [BR:
six03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BSY16_1408 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BSY16_1408 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
AAA_16
Kinesin
UB2H
SWI2_SNF2
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
AOF89300
LinkDB
All DBs
Position
1474874..1477951
Genome browser
AA seq
1025 aa
AA seq
DB search
MSGSVSDWVKQLEAEAEAAGIESRREVASKAGKHRKTVENAARRHTENVEAEARAKRSGQ
TAAAGRPAPRAEASPKGGAAVSASKTSRGVSIGGSSDPKTRAAAGLNPVSGMDTSLEDAV
SQNAGAAVTATVEALSALIESGNPLFKDGKLWTPHRPARPEKSEGGIPIRMISEYQPAGD
QPTAIKDLVEGLGSGERNQVLLGVTGSGKTFTMAKVIEATQRPAVILAPNKTLAAQLYSE
FKNFFPENAVEYFVSYYDYYQPEAYVPRSDTFIEKESSINEQIDRMRHSATRSLIERDDC
IIVASVSCIYGIGSVETYTAMTFQMQVGERLDQRQLLADLVAQQYKRREMDFQRGSFRVR
GDTIEIFPAHLEDAAWRISMFGDEIDAITEFDPLTGQKTGDLKSVKIYANSHYVTPRPTL
NGAIKAIKEELKHRLVELEKAGRLLEAQRLEQRTRYDVEMLEATGSCAGIENYSRYLTGR
KPGEPPPTLFEYIPDNALIFIDESHVTIPQIGGMYRGDFRRKATLAEYGFRLPSCMDNRP
LRFEEWDAMRPDTIAVSATPGNWEMEAAGGVFAEQVIRPTGLIDPPVEVRPAKSQVDDVL
GEIRETAQAGYRTLVTVLTKRMAEDLTEYLHEQGVRVRYMHSDIDTLERIEIIRDLRLGA
FDVLVGINLLREGLDIPECGFVAILDADKEGFLRSETSLVQTIGRAARNVDGKVILYADN
ITGSMQRAMDETSRRREKQVAYNTAHGITPESVKARISDILDSVYERDHVRADISGVSGK
GFADGGNLVGNNLQTHLNALEKAMRDAAADLDFEKAARLRDEIKRLKAAELAVMDDPMAR
QEAANAEGASGKSKGAAKAQDAGKKTATHLPLEGGGRRAAAGGGDPATTADTGEDHPTPD
LRSDPPPQGEGKAGTSYFQKPALDDMGRDVATPAGKSLFRKNSLDEMTVGRTEKPVTGNL
PARPDETLASKKRTAPLLEGQPERATGTDDAKPVVRGKVGVGSYEDPAEAKRKGRTKGKT
GRPGQ
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
ttgtccggcagcgtctccgactgggtgaagcagctcgaggcggaagcggaggccgcaggc
atcgaaagccgccgcgaggtcgcgtcgaaggccggcaaacaccgcaagacggtggagaac
gccgcccgccgccacacggaaaacgtcgaagcggaagccagagcgaagcgcagcggccag
acggccgccgccggtcgtccggcgccccgcgcggaggccagcccgaagggcggagcggcc
gtgagcgcaagcaagacatcccgcggcgtgtcgatcggcggctcgtccgacccgaagacc
cgcgccgcggccggcctcaacccggtgtccggcatggacacctcgctggaggacgccgtc
tcgcagaatgcgggtgcggccgtcaccgcgacggtggaggcgctctcggcgctcatcgag
agcggcaacccgctgttcaaggacggcaagctgtggacgccgcaccgcccggcccggccg
gaaaagtcggagggcggcatccccatccgcatgatttccgaataccagcccgccggcgac
cagccgaccgccatcaaggacctcgtcgagggacttggctccggcgagcgcaaccaggtg
ctgctcggcgtcaccggctccggaaaaaccttcaccatggccaaggtgatcgaggcgacg
cagcgcccggcggtcatcctcgcgccgaacaagacgctggccgcgcagctctattccgag
ttcaagaacttcttcccggaaaacgcggtcgaatatttcgtctcctactacgattattac
cagccggaagcctatgtgccgcgctcggacacgttcatcgagaaggaatcctcgatcaac
gagcagatcgaccgcatgcgccactcggccacccgctcgctgatcgagcgcgacgactgc
atcatcgtcgcctcggtctcctgcatctacggtatcggctcggtcgagacctacaccgcc
atgaccttccagatgcaggtcggcgaacggctcgaccagcgccagctgctcgccgatctc
gtcgcccagcaatacaagcgccgcgagatggattttcagcgcggctcgttccgcgtccgc
ggcgacacgatcgaaatcttccccgcccatctggaggatgccgcctggcgcatcagcatg
ttcggcgacgagatcgacgcgatcaccgaattcgacccgctgaccggccagaagaccggc
gacctgaagtcggtcaagatctacgccaacagccactatgtcacgccccgccccaccctc
aacggcgccatcaaggcgatcaaggaggagctgaagcaccgtctcgtcgagctggaaaag
gccggccgcctcttggaagcgcagcgcctcgagcagcgcacgcgttatgatgtcgagatg
ctggaggccaccggctcctgcgccggcatcgagaactattcgcgctacctcacgggccgc
aagcccggcgagccgccgccgacgctgttcgaatacatccccgacaacgcgctgatcttc
atcgacgaaagccacgtcacgatcccgcagatcggcggcatgtaccgcggcgacttccgc
cgcaaggcaacgctggcggaatacggtttccgcctgccctcctgcatggacaaccgcccg
ctgcgcttcgaggaatgggatgccatgcggccggatacgatcgccgtgtcggcgacgccc
ggcaactgggagatggaagcggccggcggcgtcttcgccgagcaggtcattcgcccgacc
gggctgatcgatccgcccgtggaggtgcgcccggcgaaaagccaggtggacgacgtgctg
ggcgaaatccgcgagacggcgcaggccggctaccgcacgctcgtcaccgtgcttaccaag
cgcatggccgaagacctcaccgaatacctgcacgagcagggtgttcgcgtgcgctacatg
cactcggacatcgacacgctggagcgcatcgagatcatccgcgacctgcgtctcggcgcc
ttcgacgtgctggtcggcatcaacctgctgcgcgaaggcctcgacattccggaatgcggc
ttcgtcgccatcctcgatgccgacaaggaaggttttctgcgctccgaaacctcgctggtc
cagaccattggccgcgcggcgcgaaacgtcgacggcaaggtcatcctctatgccgacaac
atcaccggctccatgcagcgcgccatggacgagacgagccgccgccgcgaaaagcaggtg
gcctacaacacggcgcacggcatcaccccggaatcggtgaaggccaggatttccgacatc
ctcgactcggtctacgagcgcgaccatgtgcgcgccgacatttccggcgtctccggcaag
ggttttgccgatggcggcaatctcgtcggcaacaacttgcagacccatctcaacgcgctg
gaaaaagccatgcgcgacgccgccgccgacctcgacttcgaaaaggccgcccgcctgcgc
gacgaaatcaaacgcctcaaggccgccgaactcgccgtcatggacgacccgatggcgcgg
caagaggcggcaaatgccgaaggcgcgagcgggaaatctaaaggcgccgcgaaggcgcag
gatgccggaaagaagacggccacccacctcccccttgaggggggaggtcgccgcgcagcg
gcgggtgggggtgaccccgccacaaccgccgacaccggagaggatcaccccaccccggac
ctccggtccgaccctccccctcaaggggagggtaaagccggcaccagctatttccagaaa
cccgccctagacgacatgggccgcgacgtcgcgaccccggccggcaaatccctgttccgc
aagaacagcctggacgaaatgaccgtcggccgcaccgaaaaacccgtcaccggtaacctc
cccgcccgcccggacgaaaccctcgccagcaagaaacgcaccgcccccctgctcgaaggc
cagccggaacgcgcaaccggcaccgacgacgccaaaccggtcgtgcggggaaaggtcggc
gtcgggagctatgaggatccggcggaggcgaagcgcaaggggcgcacgaaggggaaaacg
gggcgtccggggcagtga
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