Sinorhizobium sp. RAC02: BSY16_1422
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Entry
BSY16_1422 CDS
T04514
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
six
Sinorhizobium sp. RAC02
Pathway
six03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
six00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BSY16_1422 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
six03021
]
BSY16_1422 (rpoA)
03400 DNA repair and recombination proteins [BR:
six03400
]
BSY16_1422 (rpoA)
Enzymes [BR:
six01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BSY16_1422 (rpoA)
Transcription machinery [BR:
six03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BSY16_1422 (rpoA)
DNA repair and recombination proteins [BR:
six03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BSY16_1422 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
IDH
McdB_C
Motif
Other DBs
NCBI-ProteinID:
AOF89018
LinkDB
All DBs
Position
complement(1490347..1491357)
Genome browser
AA seq
336 aa
AA seq
DB search
MIQKNWQELIKPNKVEFASSGRTKASLVAEPLERGFGLTLGNALRRVLLSSLRGAAVTAV
QIDGVLHEFSSIPGVREDVTDIVLNIKEIAIKMDGDDSKRMVVRKQGPGVVTAGDIQTVG
DIEILNPNHVICTLDEGAEIRMEFTVNNGKGYVPADRNRSEDAPIGLIPVDSLYSPVKKV
SYKVENTREGQVLDYDKLTMSIETDGSVTGEDAIAFAARILQDQLSVFVNFDEPQKEAEE
ESVTELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLN
EIKEVLASMGLHLGMEVPAWPPENIEDLAKRYEDQY
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgatccagaaaaactggcaggaactgatcaagccgaacaaggtggaattcgcctcctcc
ggccgcaccaaggcaagccttgttgcagagccgctggagcgtggcttcggcctgacgctc
ggcaacgcgctgcgtcgcgttctcctgtcgtcgctgcgtggcgcggctgttaccgccgtg
cagatcgatggcgtcctgcacgaattctcgtcgatcccgggtgtccgcgaagacgtgacc
gatatcgtgctcaacatcaaggaaatcgccatcaagatggatggcgacgattccaagcgt
atggtcgtgcgcaagcagggtccgggcgttgttacggctggtgacatccagacggtcggc
gacatcgagatcctgaaccccaaccatgtcatctgcaccctcgacgagggcgcggaaatc
cgcatggagttcacggtcaacaacggcaagggctacgtcccggccgaccgcaaccgttcc
gaagacgcaccgatcggccttatcccggtcgacagcctctactcgccggtcaagaaagtg
tcctacaaggtggaaaacacccgtgaaggccaggttctcgactatgacaagctgaccatg
tccatcgagactgacggctccgttaccggcgaagatgcgatcgcgttcgcggcccgtatt
cttcaggaccagctctcggtcttcgtcaacttcgacgaaccgcagaaggaagccgaagaa
gagtcggtcaccgagctcgccttcaacccggcgctcctcaagaaggtcgacgaactggaa
ctttcggtccgttcggcgaactgcctgaagaacgacaacatcgtctacattggcgatctc
attcagaagaccgaagccgaaatgcttcgcactccgaattttggtcgcaagtcgctgaac
gaaatcaaggaagttctcgcttccatgggcctgcacctcggcatggaagtgccggcatgg
ccgcccgagaacatcgaagatctcgccaagcgctacgaagaccagtactaa
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