Sinorhizobium sp. RAC02: BSY16_1455
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Entry
BSY16_1455 CDS
T04514
Name
(GenBank) DNA-directed RNA polymerase, beta'' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
six
Sinorhizobium sp. RAC02
Pathway
six03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
six00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BSY16_1455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
six03021
]
BSY16_1455
03400 DNA repair and recombination proteins [BR:
six03400
]
BSY16_1455
Enzymes [BR:
six01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BSY16_1455
Transcription machinery [BR:
six03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BSY16_1455
DNA repair and recombination proteins [BR:
six03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BSY16_1455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
Apocytochr_F_C
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
AOF89320
LinkDB
All DBs
Position
complement(1513308..1517519)
Genome browser
AA seq
1403 aa
AA seq
DB search
MNQEVMNLFNPQVPAQTFDSIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCA
RIFGPIKDYECLCGKYKRMKYKGIICEKCGVEVTLSRVRRERMGHIELAAPVAHIWFLKS
LPSRISTLLDMTLKDVERVLYFENYIVTEPGLTALKENQLLSEEEYMIAVDEYGEDQFTA
MIGAEAIFEMLASMNLERIAGDLRSDLAETTSELKQKKLMKRLKIVENFMESGNRPEWMI
MKVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPGIIIRNEKRM
LQESVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTG
PELKLHQCGLPKKMALELFKPFIYARLDAKGFSSTVKQAKKLVEKEKPEVWDILDEVIRE
HPVLLNRAPTLHRLGIQAFEPILVEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILHPANGAPIIVPSQDMVLGLYYLSILNQNEPGEGMAFSDMGELHHALE
NKVVTLHAKIRGRFKSVDGEGKPYTKIFETTPGRMIIGELLPKNGNIPFDICNQEMTKKN
ISKMIDTVYRHCGQKDTVIFCDRIMQLGFSHACRAGISFGKDDMVIPDTKAKIVGDTESL
VKEYEQQYNDGLITQGEKYNKVVDAWGKATEKVAEDMMARIKAVEFDPETGRQKPMNAIY
MMSHSGARGSPSQMRQLGGMRGLMAKPSGEIIETPIISNFKEGLTVNEYFNSTHGARKGL
ADTALKTANSGYLTRRLVDVAQDCIVTHVDCGTDKGLTMTAIVDAGQVVASIGTRVLGRT
ALDDIDHPVTGERIVDAGRMILEADVVLIEKAGIQSIRIRSALTCEIQTGVCGVCYGRDL
ARGTPVNMGEAVGVIAAQSIGEPGTQLTMRTFHLGGTATVVDQSFLEASYEGTVQIKNRN
MLRNSDGNLVAMGRNMAVTILDERGVERSSQRVAYGSKIFVDDGDKVKRGQRLAEWDPYT
RPMMTEVEGTVHFEDVVDGISVLESTDESTGITKRSVIDWRSTPRGTDLKPAIIIKDKNG
AVAKLSRGGEARFMLSVDAILSVEPGQKVSQGDVLARSPLESAKTKDITGGLPRVAELFE
ARRPKDHAVIAEIDGTVRFGRDYKNKRRVMIEPAEDGVEPVEYLIPKGKPFHLQDGDYIE
KGDYILDGNPAPHDILAIKGVEALASYLVNEIQEVYRLQGVVINDKHIEVIVRQMLQKVE
ITDAGDSTYIVGDNIDRIELEDVNDGLIEEGKKPAYGDPVLLGITKASLQTPSFISAASF
QETTKVLTEAAIAGKTDGLQGLKENVIVGRLIPAGTGGTMTQIRRIATARDEMILDERRK
STGAGVATPMLADLAGGEGAAAE
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagaggtcatgaaccttttcaatccgcaggtgcctgcgcagacgttcgattcc
atccggatctcgatcgcttctccggaaaagattctttcctggtcttacggtgagatcaag
aagccggaaacgatcaactaccgcacgttcaagccggaacgcgacggtctgttctgcgcg
cgcattttcgggccgatcaaggactacgagtgcctgtgcggcaagtacaagcgcatgaag
tacaagggcatcatctgcgaaaagtgcggcgtcgaagtcacgctgtcgcgcgttcgccgt
gagcgtatgggccatatcgagctcgccgctcccgtcgcccacatctggttcctgaagtcg
cttccctcgcgcatttcgacgctgctcgacatgacgctgaaggatgtcgaacgcgttctc
tattttgagaactacatcgtgaccgagcccggcctcaccgcgctcaaggaaaaccagctt
ctttccgaagaagaatacatgatcgccgtcgatgaatatggtgaagaccagttcacggcg
atgatcggcgccgaggccatcttcgagatgctcgcatcgatgaacctcgagcggattgct
ggcgacctgcgttcggacctggcggaaaccacgtcggagctgaagcagaagaagctgatg
aagcgcctgaagatcgtcgagaacttcatggaatccggcaaccgtccggaatggatgatc
atgaaggtcgttccggtgatcccgccggacctgcgtccgctggttccgcttgacggcggc
cgcttcgcgacgtccgacctcaacgatctgtaccgccgcgtcatcaaccgtaacaaccgt
ctgaagcgcctgatcgaactgcgcgcaccgggcatcatcatccgtaacgagaagcgcatg
cttcaggaatcggttgacgccctgttcgacaacggccgccgcggccgcgtcatcacgggt
gccaacaagcgtccgctgaagtcgctgtccgacatgctcaagggcaagcagggccgcttc
cgccagaacctgctcggcaagcgcgtcgactattccggccgttcggttatcgtgaccggt
ccggaactgaagctgcaccagtgcggcctgccgaagaagatggcgctcgaactgttcaag
ccgttcatctacgcccgcctcgacgcgaagggtttctcctcgaccgtcaagcaggccaag
aagctcgttgaaaaggaaaagccggaagtctgggatatcctcgacgaggtcatccgcgaa
catccggttctcctgaaccgcgcaccgacgctgcaccgcctgggcatccaggccttcgaa
ccgatcctggtcgaaggcaaggccatccagctgcatccgctcgtctgcacggccttcaac
gccgacttcgacggtgaccagatggctgttcacgttccgctctcgctggaagcccagctg
gaagcgcgcgtgctcatgatgtcgacgaacaacattctgcacccggcgaacggcgcaccg
atcatcgttccgtcgcaggacatggttctcggcctctactatctgtcgatcctgaaccag
aacgagccgggcgaaggcatggccttctccgacatgggcgaactgcaccatgcgctcgaa
aacaaggtcgtcacgctgcacgcgaagatccgtggccgcttcaagtcggtcgatggtgaa
ggcaagccctacaccaagatcttcgaaacgacgcctggccgcatgatcatcggcgaactg
ctgccgaagaacggcaacattccgttcgacatctgcaaccaggaaatgaccaagaagaac
atctccaagatgatcgacacggtctaccgtcactgcggccagaaggacacggtcatcttc
tgcgaccgcatcatgcagctcggcttcagccacgcctgccgcgccggcatttcgttcggc
aaggacgacatggtcattccggacaccaaggccaagatcgtcggtgacaccgaaagtctg
gtgaaggaatacgaacagcagtacaacgacggcctgatcacccagggcgagaagtacaac
aaggtcgttgacgcttggggcaaggctaccgaaaaggtcgccgaggacatgatggcccgc
attaaggccgtagagttcgatcccgagaccggtcgtcagaagccgatgaacgcgatctac
atgatgtcgcactccggcgcgcgtggctctccgagccagatgcgtcagctgggcggcatg
cgcggcctcatggccaagccgtcgggcgagatcatcgaaacgccgatcatctcgaacttc
aaggaaggcctgaccgtgaacgagtacttcaactcgacgcacggtgcccgtaagggtctc
gcagacaccgccttgaagaccgcgaactccggttacctgacccgccgtctcgtcgacgtc
gcgcaggattgcatcgtcacgcatgtcgactgcggcaccgacaagggcctcacgatgacg
gcgatcgtcgacgccggtcaggtcgtggcttcgatcggtacccgcgttctcggccgtacc
gcgctggacgacatcgatcatccggtcacgggtgagcgtatcgtcgatgcgggccgaatg
atcctcgaggccgacgtggtcctgatcgagaaggctggtatccagtcgatccgtatccgt
tcggcgctgacgtgcgaaatccagaccggcgtctgcggcgtctgctatggtcgcgacctt
gcacgcggcacgcccgtcaacatgggcgaagccgttggcgtcatcgcggcacagtcgatc
ggcgagccgggcacccagcttaccatgcgtaccttccacttgggcggcacggcgaccgtg
gtcgaccagtcgttcctggaagcgtcgtatgaaggcacggtgcagatcaagaaccgcaac
atgctgcgcaactccgacgggaacctcgtcgcgatgggccgtaacatggcggtcacgatc
ctcgacgagcgcggcgtggaacggtcctcgcagcgtgttgcctacggttcgaagatcttc
gtggacgacggcgacaaggtgaagcgcggccagcgtctcgccgagtgggacccctacacc
cgtccgatgatgacggaagtcgagggtaccgttcacttcgaagacgtcgtcgacggtatc
tcggttctggaatcgacggacgagtccaccggcatcaccaagcgttcggtcatcgactgg
cgctcgacgccgcgcggtacggacctgaagccggccatcatcatcaaggacaagaatggc
gctgtcgccaagctgtcccgcggtggcgaagctcgcttcatgctctcggtcgacgcgatc
ctgtcggtcgagccgggccagaaggtctcccagggtgacgttcttgcccgctcgccgctg
gaaagcgccaagaccaaggacatcaccggtggtctgccgcgtgttgccgaactgttcgaa
gcccgtcgtccgaaggaccacgccgtcatcgctgagatcgacggtaccgtccgcttcggc
cgcgactacaagaacaagcgtcgcgtgatgatcgagccggcggaagacggtgtcgagccg
gtcgagtacctgatcccgaagggcaagcccttccatcttcaggatggcgactacatcgaa
aagggtgactacatcctcgacggcaatcctgcgccgcacgacatcctggcgatcaagggc
gtggaagcactcgcttcctacctcgtgaacgaaatccaggaagtctaccgcctgcagggc
gttgtgatcaacgacaagcacatcgaggtgatcgttcgccagatgctgcagaaggtcgag
atcaccgatgctggcgactcgacgtatatcgtcggcgacaacatcgaccgcatcgagctg
gaagacgtcaacgatggcctgatcgaggaaggcaagaagccggcttacggcgatccggtc
ctcctcggcatcaccaaggcgtcgctgcagaccccgtcgttcatctcggccgcatccttc
caggagaccaccaaggttctcacggaagctgcgatcgccggcaagaccgacggcctgcag
ggcctcaaggaaaacgtcatcgtcggccgcctcatcccggccggtaccggtggcacgatg
acccagatccgccgcatcgcgacggcccgcgacgagatgatcctcgacgagcgccgcaag
tcgaccggtgctggcgttgcaacccctatgctggcggacctcgccggcggcgagggcgca
gctgccgagtaa
DBGET
integrated database retrieval system
